Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq29 226 5e-57
>seq29
Length=7638
Score = 226 bits (250), Expect = 5e-57
Identities = 230/290 (79%), Gaps = 16/290 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 1449 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 1392
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1391 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1332
Query 121 GAACGGGGTGATTCTCT---CCT-GCACATCGTAGTCGGATACGAATAGG-----CTTCG 171
||| | | ||||| ||| ||| |||||| |||| ||||||||||| | || |
Sbjct 1331 GAAAGCGATGATT-TCTTGCCCTCGCACATTTTAGTTGGATACGAATAAGGCACTCTGTG 1273
Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGC 228
| | ||||| |||||||| ||||| || || | ||||| | | ||| ||
Sbjct 1272 TCGCTGAACCATAGCAGGCTGGCAATGGTGCTTTTAACGGAAAGGTTTTAAGTGCT-TGC 1214
Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||| ||||| ||| |||||| |||||||||||||||| |||||
Sbjct 1213 CGGTGGATAGCAATGTCATTATGCGCGAGGATAAATCCTTTGCATACGAC 1164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199476224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |