Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq45 224 8e-54 seq65 174 1e-38 seq52 82.4 6e-11 >seq45 Length=88998 Score = 224 bits (248), Expect = 8e-54 Identities = 413/601 (69%), Gaps = 11/601 (2%) Strand=Plus/Minus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 || || |||||||| ||| |||| | || ||||||| |||||||| ||||| || || Sbjct 65706 TTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAGAGGCC 65647 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176 || |||||||| | ||||| ||||| ||||||| ||| || | |||||| | | Sbjct 65646 TCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAACAGA 65587 Query 61177 TCGAGCGGTGAACAACA-----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGG 61231 | || ||| | | ||| || | | |||||||| |||||||| ||||||| Sbjct 65586 CTCAACGAC-AACGAGAGATACTTTGTTTCGAGA-GTGTTGGCCTTCTTTGCTGCTTCGG 65529 Query 61232 ACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGG 61291 |||| || ||||| ||||| || | || ||| | ||||||||||| | |||| Sbjct 65528 ACGGCATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCCGAGGTGCAAGTTCCTGAGG 65469 Query 61292 CGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTG 61351 | ||||||||||| |||||||| |||||||| |||||||||| | |||| Sbjct 65468 CCAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGC 65409 Query 61352 TTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCG 61411 |||| ||||| || ||| ||| ||| | |||| ||| | ||||| ||||| | Sbjct 65408 TTCTGATCGACACCTACGTCAAGGACCCTAAGGAAGCTGAGTTCCTTTTCAACGCCATTG 65349 Query 61412 AGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAA 61471 |||| || || | ||| ||| || || |||||| | | ||||||| | || | Sbjct 65348 AGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCA--ACGACGA 65291 Query 61472 CG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAG 61529 | || |||| || || | | || ||||| | || |||||| | || ||| Sbjct 65290 GGAAGCCCTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTC 65231 Query 61530 TGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTT 61589 ||| ||||||||| | ||||| ||| | ||||| | ||||| ||||| ||||||||||| Sbjct 65230 TGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTT 65171 Query 61590 CAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATT 61649 | || |||||||| | | |||||||| ||||| || ||||| | |||| || Sbjct 65170 CTCGAACGAGTTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTT 65111 Query 61650 C 61650 | Sbjct 65110 C 65110 >seq65 Length=94251 Score = 174 bits (192), Expect = 1e-38 Identities = 544/834 (65%), Gaps = 14/834 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 |||||||| | || || | || || || || | ||| || |||| | ||||||||| Sbjct 84382 GGAAGGGCGATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACA 84323 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 |||||| ||||| |||| | ||| | || | |||| || || ||||| Sbjct 84322 ATTTCGCAGCACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAG 84263 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||||| |||| | || ||||| || || |||| ||| | ||| Sbjct 84262 TTGCAGGCGTCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATG 84203 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTA---CGTAC-CGCCCTACCTTTGCGT-TCGT 66236 |||| ||| || ||||||| ||||| ||| | || ||| ||||| ||| || Sbjct 84202 GCGTACCACAGCTTCTGTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATC-- 84145 Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGT 66296 || | |||||| | | ||| || || | || ||||| || | |||| || | Sbjct 84144 --TGGT-GTAGAGCTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGG 84088 Query 66297 GTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTA 66356 || | | ||||| ||| ||| | | ||| || || | ||| || || || || | Sbjct 84087 AAGGCGAGAACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAA 84028 Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 |||| || || ||| || || | |||| |||||| | || || || || || | Sbjct 84027 TCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGA 83968 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 ||||| || ||||| || || | |||||||| || | ||| | || |||| ||| Sbjct 83967 TGTCGATAAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAG 83908 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 || ||| ||| || ||||||||||| | ||| |||||||| || | || ||| | Sbjct 83907 GCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTG 83848 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | | || ||||| || |||| ||||| || ||||| || || | | || | Sbjct 83847 GAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGT 83788 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCAC 66654 ||||| | ||||||||| || || || | ||| ||||| |||||| || | Sbjct 83787 TGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGG 83728 Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714 |||| | |||||||| |||||||| |||| |||| | | | | || ||| | Sbjct 83727 TGTC--ATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACAT 83670 Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774 || || | || || |||| || || || || | ||||| || ||| | | | Sbjct 83669 CTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTG 83610 Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 ||||| ||||||||||||||||| ||||| |||||||| || || Sbjct 83609 CGACATCAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACC 83556 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| ||||||||| |||||| |||| ||| || || ||||||||||||||| Sbjct 85294 TCAACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGCCGGTC 85235 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAA-TTTTGCATAATTCGGCTC 65196 ||||| || ||| ||||||| |||||||| | || || ||| || || || Sbjct 85234 TTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGTTGGGTTC 85175 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | || ||||||| |||||| ||| |||||||| || | || || ||||| Sbjct 85174 -TTGAGGTGGATATTCATCGACTGCGACTGGTCGATGTACGCGCCTCTGTCGGCCGCCAT 85116 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGG 65302 ||| || || | || |||||||||||||| ||||||| Sbjct 85115 GTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGG 85070 >seq52 Length=883241 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| | ||| |||||||| || || || || | ||| | || || || || | Sbjct 650172 CATAAACAAATCTGGTATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTT 650113 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || ||||| | |||||| ||||||||||| | ||| |||||||| || || | || Sbjct 650112 TCCATGGTTTTTCCTCAAGTCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATA 650053 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||| || | ||| | ||| |||||||| || ||||| ||| |||| Sbjct 650052 CATGCAAAAAGCGCCTGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTT 649993 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||||| | | ||| || || || ||||| ||| | ||||| || || Sbjct 649992 AAAGACTTGAATCATAGGCACAAGTCCGTTGGATGTACCATTAGTTCC 649945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567680206240