Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq45 224 8e-54
seq65 174 1e-38
seq52 82.4 6e-11
>seq45
Length=88998
Score = 224 bits (248), Expect = 8e-54
Identities = 413/601 (69%), Gaps = 11/601 (2%)
Strand=Plus/Minus
Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116
|| || |||||||| ||| |||| | || ||||||| |||||||| ||||| || ||
Sbjct 65706 TTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAGAGGCC 65647
Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176
|| |||||||| | ||||| ||||| ||||||| ||| || | |||||| | |
Sbjct 65646 TCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAACAGA 65587
Query 61177 TCGAGCGGTGAACAACA-----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGG 61231
| || ||| | | ||| || | | |||||||| |||||||| |||||||
Sbjct 65586 CTCAACGAC-AACGAGAGATACTTTGTTTCGAGA-GTGTTGGCCTTCTTTGCTGCTTCGG 65529
Query 61232 ACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGG 61291
|||| || ||||| ||||| || | || ||| | ||||||||||| | ||||
Sbjct 65528 ACGGCATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCCGAGGTGCAAGTTCCTGAGG 65469
Query 61292 CGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTG 61351
| ||||||||||| |||||||| |||||||| |||||||||| | ||||
Sbjct 65468 CCAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGC 65409
Query 61352 TTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCG 61411
|||| ||||| || ||| ||| ||| | |||| ||| | ||||| ||||| |
Sbjct 65408 TTCTGATCGACACCTACGTCAAGGACCCTAAGGAAGCTGAGTTCCTTTTCAACGCCATTG 65349
Query 61412 AGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAA 61471
|||| || || | ||| ||| || || |||||| | | ||||||| | || |
Sbjct 65348 AGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCA--ACGACGA 65291
Query 61472 CG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAG 61529
| || |||| || || | | || ||||| | || |||||| | || |||
Sbjct 65290 GGAAGCCCTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTC 65231
Query 61530 TGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTT 61589
||| ||||||||| | ||||| ||| | ||||| | ||||| ||||| |||||||||||
Sbjct 65230 TGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTT 65171
Query 61590 CAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATT 61649
| || |||||||| | | |||||||| ||||| || ||||| | |||| ||
Sbjct 65170 CTCGAACGAGTTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTT 65111
Query 61650 C 61650
|
Sbjct 65110 C 65110
>seq65
Length=94251
Score = 174 bits (192), Expect = 1e-38
Identities = 544/834 (65%), Gaps = 14/834 (2%)
Strand=Plus/Minus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|||||||| | || || | || || || || | ||| || |||| | |||||||||
Sbjct 84382 GGAAGGGCGATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACA 84323
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|||||| ||||| |||| | ||| | || | |||| || || |||||
Sbjct 84322 ATTTCGCAGCACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAG 84263
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| || |||||||||| |||| | || ||||| || || |||| ||| | |||
Sbjct 84262 TTGCAGGCGTCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATG 84203
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTA---CGTAC-CGCCCTACCTTTGCGT-TCGT 66236
|||| ||| || ||||||| ||||| ||| | || ||| ||||| ||| ||
Sbjct 84202 GCGTACCACAGCTTCTGTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATC-- 84145
Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGT 66296
|| | |||||| | | ||| || || | || ||||| || | |||| || |
Sbjct 84144 --TGGT-GTAGAGCTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGG 84088
Query 66297 GTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTA 66356
|| | | ||||| ||| ||| | | ||| || || | ||| || || || || |
Sbjct 84087 AAGGCGAGAACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAA 84028
Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416
|||| || || ||| || || | |||| |||||| | || || || || || |
Sbjct 84027 TCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGA 83968
Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476
||||| || ||||| || || | |||||||| || | ||| | || |||| |||
Sbjct 83967 TGTCGATAAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAG 83908
Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536
|| ||| ||| || ||||||||||| | ||| |||||||| || | || ||| |
Sbjct 83907 GCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTG 83848
Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596
| | || ||||| || |||| ||||| || ||||| || || | | || |
Sbjct 83847 GAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGT 83788
Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCAC 66654
||||| | ||||||||| || || || | ||| ||||| |||||| || |
Sbjct 83787 TGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGG 83728
Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714
|||| | |||||||| |||||||| |||| |||| | | | | || ||| |
Sbjct 83727 TGTC--ATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACAT 83670
Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774
|| || | || || |||| || || || || | ||||| || ||| | | |
Sbjct 83669 CTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTG 83610
Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828
||||| ||||||||||||||||| ||||| |||||||| || ||
Sbjct 83609 CGACATCAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACC 83556
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || ||||| ||||||||| |||||| |||| ||| || || |||||||||||||||
Sbjct 85294 TCAACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGCCGGTC 85235
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAA-TTTTGCATAATTCGGCTC 65196
||||| || ||| ||||||| |||||||| | || || ||| || || ||
Sbjct 85234 TTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGTTGGGTTC 85175
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
| || ||||||| |||||| ||| |||||||| || | || || |||||
Sbjct 85174 -TTGAGGTGGATATTCATCGACTGCGACTGGTCGATGTACGCGCCTCTGTCGGCCGCCAT 85116
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGG 65302
||| || || | || |||||||||||||| |||||||
Sbjct 85115 GTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGG 85070
>seq52
Length=883241
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
|||||| | ||| |||||||| || || || || | ||| | || || || || |
Sbjct 650172 CATAAACAAATCTGGTATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTT 650113
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
|| || ||||| | |||||| ||||||||||| | ||| |||||||| || || | ||
Sbjct 650112 TCCATGGTTTTTCCTCAAGTCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATA 650053
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
||| || | ||| | ||| |||||||| || ||||| ||| ||||
Sbjct 650052 CATGCAAAAAGCGCCTGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTT 649993
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567
||||| | | ||| || || || ||||| ||| | ||||| || ||
Sbjct 649992 AAAGACTTGAATCATAGGCACAAGTCCGTTGGATGTACCATTAGTTCC 649945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567680206240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |