Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq7 295 1e-77 >seq7 Length=988507 Score = 295 bits (326), Expect = 1e-77 Identities = 207/230 (90%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 642102 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 642045 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| |||||| Sbjct 642044 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 641985 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||||||| |||| ||||| ||||| ||||||| | | |||||||||||||||||| Sbjct 641984 ACCCGGACCTCTCGGTCAAGG--ATAGAGCTCGTTGGCTCCGTCAGTGTAGCGCGCGTGC 641927 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 641926 GGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 641877 Score = 295 bits (326), Expect = 1e-77 Identities = 207/230 (90%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 650237 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 650180 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| |||||| Sbjct 650179 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 650120 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||||||| |||| ||||| ||||| ||||||| | | |||||||||||||||||| Sbjct 650119 ACCCGGACCTCTCGGTCAAGG--ATAGAGCTCGTTGGCTCCGTCAGTGTAGCGCGCGTGC 650062 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 650061 GGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 650012 Score = 295 bits (326), Expect = 1e-77 Identities = 207/230 (90%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 658370 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 658313 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| |||||| Sbjct 658312 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 658253 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||||||| |||| ||||| ||||| ||||||| | | |||||||||||||||||| Sbjct 658252 ACCCGGACCTCTCGGTCAAGG--ATAGAGCTCGTTGGCTCCGTCAGTGTAGCGCGCGTGC 658195 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 658194 GGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 658145 Score = 295 bits (326), Expect = 1e-77 Identities = 207/230 (90%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 666506 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 666449 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| |||||| Sbjct 666448 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 666389 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||||||| |||| ||||| ||||| ||||||| | | |||||||||||||||||| Sbjct 666388 ACCCGGACCTCTCGGTCAAGG--ATAGAGCTCGTTGGCTCCGTCAGTGTAGCGCGCGTGC 666331 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 666330 GGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 666281 Score = 295 bits (326), Expect = 1e-77 Identities = 207/230 (90%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 674643 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 674586 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| |||||| Sbjct 674585 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 674526 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||||||| |||| ||||| ||||| ||||||| | | |||||||||||||||||| Sbjct 674525 ACCCGGACCTCTCGGTCAAGG--ATAGAGCTCGTTGGCTCCGTCAGTGTAGCGCGCGTGC 674468 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 674467 GGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 674418 Score = 295 bits (326), Expect = 1e-77 Identities = 207/230 (90%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 682776 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 682719 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| |||||| Sbjct 682718 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 682659 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||||||| |||| ||||| ||||| ||||||| | | |||||||||||||||||| Sbjct 682658 ACCCGGACCTCTCGGTCAAGG--ATAGAGCTCGTTGGCTCCGTCAGTGTAGCGCGCGTGC 682601 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 682600 GGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 682551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999949005