Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq7 336 3e-90 >seq7 Length=988507 Score = 336 bits (372), Expect = 3e-90 Identities = 229/256 (89%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 641957 CTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 641898 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | | Sbjct 641897 CTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGAAA-A 641839 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || | | || | || |||||||| |||||||||||||||||||||||| |||||| Sbjct 641838 TCAGCAAAAGCCAATATCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAG 641779 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 641778 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 641719 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 641718 GAGCTCTCAATCTGTC 641703 Score = 336 bits (372), Expect = 3e-90 Identities = 229/256 (89%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 650092 CTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 650033 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | | Sbjct 650032 CTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGAAA-A 649974 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || | | || | || |||||||| |||||||||||||||||||||||| |||||| Sbjct 649973 TCAGCAAAAGCCAATATCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAG 649914 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 649913 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 649854 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 649853 GAGCTCTCAATCTGTC 649838 Score = 336 bits (372), Expect = 3e-90 Identities = 229/256 (89%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 658225 CTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 658166 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | | Sbjct 658165 CTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGAAA-A 658107 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || | | || | || |||||||| |||||||||||||||||||||||| |||||| Sbjct 658106 TCAGCAAAAGCCAATATCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAG 658047 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 658046 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 657987 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 657986 GAGCTCTCAATCTGTC 657971 Score = 336 bits (372), Expect = 3e-90 Identities = 229/256 (89%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 666361 CTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 666302 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | | Sbjct 666301 CTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGAAA-A 666243 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || | | || | || |||||||| |||||||||||||||||||||||| |||||| Sbjct 666242 TCAGCAAAAGCCAATATCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAG 666183 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 666182 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 666123 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 666122 GAGCTCTCAATCTGTC 666107 Score = 336 bits (372), Expect = 3e-90 Identities = 229/256 (89%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 674498 CTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 674439 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | | Sbjct 674438 CTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGAAA-A 674380 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || | | || | || |||||||| |||||||||||||||||||||||| |||||| Sbjct 674379 TCAGCAAAAGCCAATATCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAG 674320 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 674319 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 674260 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 674259 GAGCTCTCAATCTGTC 674244 Score = 329 bits (364), Expect = 5e-88 Identities = 228/256 (89%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 682631 CTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 682572 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | | Sbjct 682571 CTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGA-AAA 682513 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || | | || | || |||||||| |||||||||||||||||||||||| |||||| Sbjct 682512 TCAGCAAAAGCCAATATCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAG 682453 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 682452 CAGAC-AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 682394 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 682393 GAGCTCTCAATCTGTC 682378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799945967