Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq7 251 7e-65 >seq7 Length=988507 Score = 251 bits (278), Expect = 7e-65 Identities = 170/188 (90%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 641203 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATA 641262 Query 63 TTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 ||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 641263 TTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 641321 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| |||||||||| |||||| |||||||||||| Sbjct 641322 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 641381 Query 182 TGGATTTA 189 |||||||| Sbjct 641382 TGGATTTA 641389 Score = 251 bits (278), Expect = 7e-65 Identities = 170/188 (90%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 649338 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATA 649397 Query 63 TTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 ||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 649398 TTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 649456 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| |||||||||| |||||| |||||||||||| Sbjct 649457 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 649516 Query 182 TGGATTTA 189 |||||||| Sbjct 649517 TGGATTTA 649524 Score = 251 bits (278), Expect = 7e-65 Identities = 170/188 (90%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 657471 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATA 657530 Query 63 TTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 ||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 657531 TTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 657589 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| |||||||||| |||||| |||||||||||| Sbjct 657590 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 657649 Query 182 TGGATTTA 189 |||||||| Sbjct 657650 TGGATTTA 657657 Score = 251 bits (278), Expect = 7e-65 Identities = 170/188 (90%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 665607 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATA 665666 Query 63 TTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 ||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 665667 TTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 665725 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| |||||||||| |||||| |||||||||||| Sbjct 665726 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 665785 Query 182 TGGATTTA 189 |||||||| Sbjct 665786 TGGATTTA 665793 Score = 251 bits (278), Expect = 7e-65 Identities = 170/188 (90%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 673744 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATA 673803 Query 63 TTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 ||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 673804 TTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 673862 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| |||||||||| |||||| |||||||||||| Sbjct 673863 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 673922 Query 182 TGGATTTA 189 |||||||| Sbjct 673923 TGGATTTA 673930 Score = 251 bits (278), Expect = 7e-65 Identities = 170/188 (90%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 681880 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATA 681939 Query 63 TTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 ||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 681940 TTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 681998 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| |||||||||| |||||| |||||||||||| Sbjct 681999 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 682058 Query 182 TGGATTTA 189 |||||||| Sbjct 682059 TGGATTTA 682066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999965280