Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7 226 5e-57 >seq7 Length=988507 Score = 226 bits (250), Expect = 5e-57 Identities = 230/290 (79%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 645908 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 645965 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 645966 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 646025 Query 121 GAACGGGGTGATTCTCT---CCT-GCACATCGTAGTCGGATACGAATAGG-----CTTCG 171 ||| | | ||||| ||| ||| |||||| |||| ||||||||||| | || | Sbjct 646026 GAAAGCGATGATT-TCTTGCCCTCGCACATTTTAGTTGGATACGAATAAGGCACTCTGTG 646084 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| ||||| || || | ||||| | | ||| || Sbjct 646085 TCGCTGAACCATAGCAGGCTGGCAATGGTGCTTTTAACGGAAAGGTTTTAAGTGCT-TGC 646143 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 646144 CGGTGGATAGCAATGTCATTATGCGCGAGGATAAATCCTTTGCATACGAC 646193 Score = 226 bits (250), Expect = 5e-57 Identities = 230/290 (79%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 654041 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 654098 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 654099 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 654158 Query 121 GAACGGGGTGATTCTCT---CCT-GCACATCGTAGTCGGATACGAATAGG-----CTTCG 171 ||| | | ||||| ||| ||| |||||| |||| ||||||||||| | || | Sbjct 654159 GAAAGCGATGATT-TCTTGCCCTCGCACATTTTAGTTGGATACGAATAAGGCACTCTGTG 654217 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| ||||| || || | ||||| | | ||| || Sbjct 654218 TCGCTGAACCATAGCAGGCTGGCAATGGTGCTTTTAACGGAAAGGTTTTAAGTGCT-TGC 654276 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 654277 CGGTGGATAGCAATGTCATTATGCGCGAGGATAAATCCTTTGCATACGAC 654326 Score = 226 bits (250), Expect = 5e-57 Identities = 230/290 (79%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 662176 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 662233 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 662234 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 662293 Query 121 GAACGGGGTGATTCTCT---CCT-GCACATCGTAGTCGGATACGAATAGG-----CTTCG 171 ||| | | ||||| ||| ||| |||||| |||| ||||||||||| | || | Sbjct 662294 GAAAGCGATGATT-TCTTGCCCTCGCACATTTTAGTTGGATACGAATAAGGCACTCTGTG 662352 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| ||||| || || | ||||| | | ||| || Sbjct 662353 TCGCTGAACCATAGCAGGCTGGCAATGGTGCTTTTAACGGAAAGGTTTTAAGTGCT-TGC 662411 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 662412 CGGTGGATAGCAATGTCATTATGCGCGAGGATAAATCCTTTGCATACGAC 662461 Score = 226 bits (250), Expect = 5e-57 Identities = 230/290 (79%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 670312 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 670369 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 670370 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 670429 Query 121 GAACGGGGTGATTCTCT---CCT-GCACATCGTAGTCGGATACGAATAGG-----CTTCG 171 ||| | | ||||| ||| ||| |||||| |||| ||||||||||| | || | Sbjct 670430 GAAAGCGATGATT-TCTTGCCCTCGCACATTTTAGTTGGATACGAATAAGGCACTCTGTG 670488 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| ||||| || || | ||||| | | ||| || Sbjct 670489 TCGCTGAACCATAGCAGGCTGGCAATGGTGCTTTTAACGGAAAGGTTTTAAGTGCT-TGC 670547 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 670548 CGGTGGATAGCAATGTCATTATGCGCGAGGATAAATCCTTTGCATACGAC 670597 Score = 226 bits (250), Expect = 5e-57 Identities = 230/290 (79%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 678449 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 678506 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 678507 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 678566 Query 121 GAACGGGGTGATTCTCT---CCT-GCACATCGTAGTCGGATACGAATAGG-----CTTCG 171 ||| | | ||||| ||| ||| |||||| |||| ||||||||||| | || | Sbjct 678567 GAAAGCGATGATT-TCTTGCCCTCGCACATTTTAGTTGGATACGAATAAGGCACTCTGTG 678625 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| ||||| || || | ||||| | | ||| || Sbjct 678626 TCGCTGAACCATAGCAGGCTGGCAATGGTGCTTTTAACGGAAAGGTTTTAAGTGCT-TGC 678684 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 678685 CGGTGGATAGCAATGTCATTATGCGCGAGGATAAATCCTTTGCATACGAC 678734 Score = 226 bits (250), Expect = 5e-57 Identities = 230/290 (79%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| | Sbjct 686581 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 686638 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 686639 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 686698 Query 121 GAACGGGGTGATTCTCT---CCT-GCACATCGTAGTCGGATACGAATAGG-----CTTCG 171 ||| | | ||||| ||| ||| |||||| |||| ||||||||||| | || | Sbjct 686699 GAAAGCGATGATT-TCTTGCCCTCGCACATTTTAGTTGGATACGAATAAGGCACTCTGTG 686757 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| ||||| || || | ||||| | | ||| || Sbjct 686758 TCGCTGAACCATAGCAGGCTGGCAATGGTGCTTTTAACGGAAAGGTTTTAAGTGCT-TGC 686816 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 686817 CGGTGGATAGCAATGTCATTATGCGCGAGGATAAATCCTTTGCATACGAC 686866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199944448