Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 224 8e-54 seq2 174 1e-38 seq3 82.4 6e-11 >seq4 Length=1302532 Score = 224 bits (248), Expect = 8e-54 Identities = 413/601 (69%), Gaps = 11/601 (2%) Strand=Plus/Minus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 || || |||||||| ||| |||| | || ||||||| |||||||| ||||| || || Sbjct 920659 TTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAGAGGCC 920600 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176 || |||||||| | ||||| ||||| ||||||| ||| || | |||||| | | Sbjct 920599 TCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAACAGA 920540 Query 61177 TCGAGCGGTGAACAACA-----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGG 61231 | || ||| | | ||| || | | |||||||| |||||||| ||||||| Sbjct 920539 CTCAACGAC-AACGAGAGATACTTTGTTTCGAGA-GTGTTGGCCTTCTTTGCTGCTTCGG 920482 Query 61232 ACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGG 61291 |||| || ||||| ||||| || | || ||| | ||||||||||| | |||| Sbjct 920481 ACGGCATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCCGAGGTGCAAGTTCCTGAGG 920422 Query 61292 CGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTG 61351 | ||||||||||| |||||||| |||||||| |||||||||| | |||| Sbjct 920421 CCAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGC 920362 Query 61352 TTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCG 61411 |||| ||||| || ||| ||| ||| | |||| ||| | ||||| ||||| | Sbjct 920361 TTCTGATCGACACCTACGTCAAGGACCCTAAGGAAGCTGAGTTCCTTTTCAACGCCATTG 920302 Query 61412 AGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAA 61471 |||| || || | ||| ||| || || |||||| | | ||||||| | || | Sbjct 920301 AGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCA--ACGACGA 920244 Query 61472 CG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAG 61529 | || |||| || || | | || ||||| | || |||||| | || ||| Sbjct 920243 GGAAGCCCTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTC 920184 Query 61530 TGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTT 61589 ||| ||||||||| | ||||| ||| | ||||| | ||||| ||||| ||||||||||| Sbjct 920183 TGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTT 920124 Query 61590 CAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATT 61649 | || |||||||| | | |||||||| ||||| || ||||| | |||| || Sbjct 920123 CTCGAACGAGTTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTT 920064 Query 61650 C 61650 | Sbjct 920063 C 920063 >seq2 Length=1516309 Score = 174 bits (192), Expect = 1e-38 Identities = 544/834 (65%), Gaps = 14/834 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 |||||||| | || || | || || || || | ||| || |||| | ||||||||| Sbjct 917001 GGAAGGGCGATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACA 917060 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 |||||| ||||| |||| | ||| | || | |||| || || ||||| Sbjct 917061 ATTTCGCAGCACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAG 917120 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||||| |||| | || ||||| || || |||| ||| | ||| Sbjct 917121 TTGCAGGCGTCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATG 917180 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTA---CGTAC-CGCCCTACCTTTGCGT-TCGT 66236 |||| ||| || ||||||| ||||| ||| | || ||| ||||| ||| || Sbjct 917181 GCGTACCACAGCTTCTGTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATC-- 917238 Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGT 66296 || | |||||| | | ||| || || | || ||||| || | |||| || | Sbjct 917239 --TGGT-GTAGAGCTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGG 917295 Query 66297 GTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTA 66356 || | | ||||| ||| ||| | | ||| || || | ||| || || || || | Sbjct 917296 AAGGCGAGAACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAA 917355 Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 |||| || || ||| || || | |||| |||||| | || || || || || | Sbjct 917356 TCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGA 917415 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 ||||| || ||||| || || | |||||||| || | ||| | || |||| ||| Sbjct 917416 TGTCGATAAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAG 917475 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 || ||| ||| || ||||||||||| | ||| |||||||| || | || ||| | Sbjct 917476 GCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTG 917535 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | | || ||||| || |||| ||||| || ||||| || || | | || | Sbjct 917536 GAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGT 917595 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCAC 66654 ||||| | ||||||||| || || || | ||| ||||| |||||| || | Sbjct 917596 TGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGG 917655 Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714 |||| | |||||||| |||||||| |||| |||| | | | | || ||| | Sbjct 917656 TGTC--ATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACAT 917713 Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774 || || | || || |||| || || || || | ||||| || ||| | | | Sbjct 917714 CTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTG 917773 Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 ||||| ||||||||||||||||| ||||| |||||||| || || Sbjct 917774 CGACATCAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACC 917827 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| ||||||||| |||||| |||| ||| || || ||||||||||||||| Sbjct 916089 TCAACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGCCGGTC 916148 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAA-TTTTGCATAATTCGGCTC 65196 ||||| || ||| ||||||| |||||||| | || || ||| || || || Sbjct 916149 TTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGTTGGGTTC 916208 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | || ||||||| |||||| ||| |||||||| || | || || ||||| Sbjct 916209 -TTGAGGTGGATATTCATCGACTGCGACTGGTCGATGTACGCGCCTCTGTCGGCCGCCAT 916267 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGG 65302 ||| || || | || |||||||||||||| ||||||| Sbjct 916268 GTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGG 916313 >seq3 Length=1363476 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| | ||| |||||||| || || || || | ||| | || || || || | Sbjct 659062 CATAAACAAATCTGGTATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTT 659003 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || ||||| | |||||| ||||||||||| | ||| |||||||| || || | || Sbjct 659002 TCCATGGTTTTTCCTCAAGTCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATA 658943 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||| || | ||| | ||| |||||||| || ||||| ||| |||| Sbjct 658942 CATGCAAAAAGCGCCTGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTT 658883 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||||| | | ||| || || || ||||| ||| | ||||| || || Sbjct 658882 AAAGACTTGAATCATAGGCACAAGTCCGTTGGATGTACCATTAGTTCC 658835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567966082480