Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2186 271 1e-70 seq1681 271 1e-70 seq1102 268 1e-69 >seq2186 Length=43990 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 8404 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 8461 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 8462 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 8521 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 8522 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 8579 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 8580 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 8632 >seq1681 Length=332 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 2 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 59 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 60 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 119 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 120 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 177 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 178 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 230 >seq1102 Length=578 Score = 268 bits (296), Expect = 1e-69 Identities = 202/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 352 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 295 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 294 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 235 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 234 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 177 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||| Sbjct 176 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACCTCCATGG 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751981918630