Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq2186 271 1e-70
seq1681 271 1e-70
seq1102 268 1e-69
>seq2186
Length=43990
Score = 271 bits (300), Expect = 1e-70
Identities = 203/233 (87%), Gaps = 5/233 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 8404 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 8461
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||
Sbjct 8462 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 8521
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||| ||||||| | |||| | || | | |||||||||||||||||||
Sbjct 8522 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 8579
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232
||||||||| ||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 8580 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 8632
>seq1681
Length=332
Score = 271 bits (300), Expect = 1e-70
Identities = 203/233 (87%), Gaps = 5/233 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 2 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 59
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||
Sbjct 60 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 119
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||| ||||||| | |||| | || | | |||||||||||||||||||
Sbjct 120 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 177
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232
||||||||| ||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 178 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 230
>seq1102
Length=578
Score = 268 bits (296), Expect = 1e-69
Identities = 202/233 (87%), Gaps = 5/233 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 352 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 295
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||
Sbjct 294 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 235
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||| ||||||| | |||| | || | | |||||||||||||||||||
Sbjct 234 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 177
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232
||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct 176 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACCTCCATGG 124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751981918630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |