Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2186 585 1e-164 >seq2186 Length=43990 Score = 585 bits (648), Expect = 1e-164 Identities = 550/685 (80%), Gaps = 39/685 (6%) Strand=Plus/Minus Query 24 GTGAAGCTCCTTC-GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 |||| || ||||| |||||||||||||||||||||||||||||| || ||| ||||||| Sbjct 6527 GTGAGGC-CCTTCTGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAGCGGGTGGTAAAT 6469 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||| |||||||| |||| |||||||||||||| ||||||| |||| |||||| Sbjct 6468 TCCATCTAAGGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGA 6409 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC-T 201 |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| | | Sbjct 6408 TGAAAAGCACTTTGAAAAGAGAGTGAAACAGCACGTGAAATTGTTGAAAGGGAAGGGTAT 6349 Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCG--GCCGGTGCACT---CTT 255 ||| || ||| || | | |||| || | | ||| |||| | ||| || || ||| Sbjct 6348 TGCGCCC-GACATGG--GGA-TTGCGCACCGCTGCCTCTCGTGGGCGGCGCTCTGGGCTT 6293 Query 256 CTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCC 315 | | |||||||||| | || || | ||| || || | |||| ||||| | Sbjct 6292 TCCCTG---GGCCAGCATCGGTTCTTGCTGCAGGAGAAGGGGTTCTGGAACGTGGCTC-- 6238 Query 316 TTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375 ||||| | |||||||||| ||| || ||| || || |||| |||| | ||| || Sbjct 6237 TTCGGAG--TGTTATAGCCAGGGCCAGA-TGCTGCGTGCGGGGACCGAGGACTGCGG-CC 6182 Query 376 GGCTAGG------ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 | |||| |||||||| || || | | |||||||||| |||| ||||||| Sbjct 6181 GTGTAGGTCACGGATGCTGGCAGAACGGCGCAACACCGCCCGTCTTGAAACATGGACCAA 6122 Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489 |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 6121 GGAGTCTAACGTCTATGCGAGTGTTTGGGTGTGAAACCCGTACGCGTAATGAAAGTGAAC 6062 Query 490 GGAGGTGGGAACCCGTGA----------GGGTGCACCATCGACCGATCCTGATGTCT-TC 538 | |||| ||| ||| || ||| |||| |||||||||||| ||||| | || Sbjct 6061 GTAGGTCGGACCCCCTGCCCTCGGGGAGGGGAGCACGATCGACCGATCCCGATGTTTATC 6002 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 6001 GGAAGGATTTGAGTAGGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 5942 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 5941 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGA 5882 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||||||||||||| Sbjct 5881 TCGTCGAATTTGGGTATAGGGGCGA 5857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079946761100