Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2186 585 1e-164
>seq2186
Length=43990
Score = 585 bits (648), Expect = 1e-164
Identities = 550/685 (80%), Gaps = 39/685 (6%)
Strand=Plus/Minus
Query 24 GTGAAGCTCCTTC-GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
|||| || ||||| |||||||||||||||||||||||||||||| || ||| |||||||
Sbjct 6527 GTGAGGC-CCTTCTGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAGCGGGTGGTAAAT 6469
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||| |||||||| |||| |||||||||||||| ||||||| |||| ||||||
Sbjct 6468 TCCATCTAAGGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGA 6409
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC-T 201
|||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| | |
Sbjct 6408 TGAAAAGCACTTTGAAAAGAGAGTGAAACAGCACGTGAAATTGTTGAAAGGGAAGGGTAT 6349
Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCG--GCCGGTGCACT---CTT 255
||| || ||| || | | |||| || | | ||| |||| | ||| || || |||
Sbjct 6348 TGCGCCC-GACATGG--GGA-TTGCGCACCGCTGCCTCTCGTGGGCGGCGCTCTGGGCTT 6293
Query 256 CTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCC 315
| | |||||||||| | || || | ||| || || | |||| ||||| |
Sbjct 6292 TCCCTG---GGCCAGCATCGGTTCTTGCTGCAGGAGAAGGGGTTCTGGAACGTGGCTC-- 6238
Query 316 TTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375
||||| | |||||||||| ||| || ||| || || |||| |||| | ||| ||
Sbjct 6237 TTCGGAG--TGTTATAGCCAGGGCCAGA-TGCTGCGTGCGGGGACCGAGGACTGCGG-CC 6182
Query 376 GGCTAGG------ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429
| |||| |||||||| || || | | |||||||||| |||| |||||||
Sbjct 6181 GTGTAGGTCACGGATGCTGGCAGAACGGCGCAACACCGCCCGTCTTGAAACATGGACCAA 6122
Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489
|||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 6121 GGAGTCTAACGTCTATGCGAGTGTTTGGGTGTGAAACCCGTACGCGTAATGAAAGTGAAC 6062
Query 490 GGAGGTGGGAACCCGTGA----------GGGTGCACCATCGACCGATCCTGATGTCT-TC 538
| |||| ||| ||| || ||| |||| |||||||||||| ||||| | ||
Sbjct 6061 GTAGGTCGGACCCCCTGCCCTCGGGGAGGGGAGCACGATCGACCGATCCCGATGTTTATC 6002
Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6001 GGAAGGATTTGAGTAGGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 5942
Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 5941 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGA 5882
Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683
||||| |||||||||||||||||||
Sbjct 5881 TCGTCGAATTTGGGTATAGGGGCGA 5857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079946761100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |