Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq2010 178 1e-42
seq2052 159 4e-37
seq1481 156 4e-36
>seq2010
Length=228
Score = 178 bits (196), Expect = 1e-42
Identities = 129/148 (87%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 77 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 136
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 137 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 195
Query 122 CGTAATGATAAATACGGATAGTCGGGGG 149
||||||||| |||| ||| ||||||||
Sbjct 196 CGTAATGATTAATAGGGACGGTCGGGGG 223
>seq2052
Length=217
Score = 159 bits (176), Expect = 4e-37
Identities = 113/128 (88%), Gaps = 1/128 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 127 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 68
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 67 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 9
Query 122 CGTAATGA 129
||||||||
Sbjct 8 CGTAATGA 1
>seq1481
Length=397
Score = 156 bits (172), Expect = 4e-36
Identities = 112/128 (88%), Gaps = 1/128 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 271 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 330
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct 331 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCCATTTTGTTGGTTTCTAGGACC-AT 389
Query 122 CGTAATGA 129
||||||||
Sbjct 390 CGTAATGA 397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511987689280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |