Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2115 313 8e-83 seq1643 190 7e-46 >seq2115 Length=200 Score = 313 bits (346), Expect = 8e-83 Identities = 191/200 (96%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 236 GCTCCCACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||||||||||| ||||| ||||| | ||| |||||||| ||| ||||||||||||||| Sbjct 2 GCTCCCACTTATGCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTC 60 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 61 AACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 120 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 180 Query 415 TGACGAGGCATTTGGCTACC 434 |||||||||||||||||||| Sbjct 181 TGACGAGGCATTTGGCTACC 200 >seq1643 Length=344 Score = 190 bits (210), Expect = 7e-46 Identities = 105/105 (100%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 344 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 285 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 284 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635159414336