Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2119 194 1e-44 >seq2119 Length=607893 Score = 194 bits (214), Expect = 1e-44 Identities = 572/876 (65%), Gaps = 18/876 (2%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 || || ||| ||||| | || ||||||| |||||||| ||||| ||||| || |||||| Sbjct 160234 TTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGG 160293 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGG- 61184 || | |||||| | ||| | |||||||| || |||| ||| | | || || || Sbjct 160294 ACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAA 160353 Query 61185 --TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 |||| | |||||| | || | ||||||||||| ||||| || ||||| ||| Sbjct 160354 AATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTC 160413 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| |||||| | || |||| | || || ||| | | ||||| |||||| Sbjct 160414 AATGAAAATTTAGTTGAGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTC 160473 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 || || ||||| ||| ||||| || | || ||||| | || | | | || ||| Sbjct 160474 TATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGAT 160533 Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCG 61422 || ||||||| || | |||| ||||| || |||||||| || || || || || Sbjct 160534 ACTTACATCAAAGATCCAAAGGAAAGTGAATTCTTATTCAATGCAATTGAAACAATCCCA 160593 Query 61423 GCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTT 61482 | ||| || || || |||||||| || ||||| | || | || ||| Sbjct 160594 TGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAGATGCGTTGTTT 160653 Query 61483 GGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCC 61542 | || | ||| |||||||||| | || || ||| | || ||| ||| || ||||| Sbjct 160654 GCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCA 160713 Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 | ||||| |||||||| || | || | ||||| ||| |||| ||| ||| ||| || Sbjct 160714 TCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTG 160773 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTG 61662 || | | || || || | ||| ||||||||| |||||| || || || Sbjct 160774 ATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTTTCAC---AT--- 160827 Query 61663 GTGAATCGTCCGTCGGAGG---AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATC 61719 |||| | | | | || | | ||| | | || || || || || ||| Sbjct 160828 TTGAACCATACCCCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATT 160887 Query 61720 GAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTA 61779 ||| || ||| | |||||||| | || ||| | |||| |||||| | | Sbjct 160888 GAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTG 160947 Query 61780 ATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCG 61838 |||| |||||| | || |||||||| || | || || | | ||| || | |||| | Sbjct 160948 ATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATTGCATTAGGATGTGAAAAG 161007 Query 61839 GATCTATAATACG--AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896 | |||| ||| | ||| ||||| || || ||||| | ||||| || | ||| || Sbjct 161008 G---TATACGACGTTACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAA 161064 Query 61897 ACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 || || |||||||| || | || |||||| ||| Sbjct 161065 ACAAACTTTTTCGAAAAGAGAGTCTCCGACTACCAA 161100 Score = 100 bits (110), Expect = 2e-16 Identities = 317/489 (65%), Gaps = 2/489 (0%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| || || || |||||| |||| ||| ||||| || ||||| || ||| Sbjct 506388 TCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGTC 506329 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTT-TGCATAATTCGGCTC 65196 ||||| || |||| ||||||||||||| || | |||||| ||| || || | Sbjct 506328 TTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTT-GGATT 506270 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||| || |||| || || |||||| | ||| ||| | ||| |||||||| Sbjct 506269 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 506210 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 || || || | ||| ||||||||||| ||||| || | | | ||| Sbjct 506209 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTCCTTGATCTCTTG 506150 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||||| | | | || ||| | |||||| | || || || | || ||| || Sbjct 506149 AGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAGA 506090 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||| | |||| || | | || | | || | | | |||| | ||||| Sbjct 506089 ATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGAA 506030 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 || |||| | || | | || || ||||| ||| ||||||||| |||| | Sbjct 506029 TTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGTT 505970 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 || ||||||||||| | || || ||||| ||||| || || || | |||||| |||| Sbjct 505969 GTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTCT 505910 Query 65557 CAATCCGTT 65565 ||| || || Sbjct 505909 CAAACCATT 505901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397555973816480