Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq122 194 1e-44 seq546 91.5 1e-13 >seq122 Length=40810 Score = 194 bits (214), Expect = 1e-44 Identities = 572/876 (65%), Gaps = 18/876 (2%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 || || ||| ||||| | || ||||||| |||||||| ||||| ||||| || |||||| Sbjct 15345 TTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGG 15286 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGG- 61184 || | |||||| | ||| | |||||||| || |||| ||| | | || || || Sbjct 15285 ACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAA 15226 Query 61185 --TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 |||| | |||||| | || | ||||||||||| ||||| || ||||| ||| Sbjct 15225 AATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTC 15166 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| |||||| | || |||| | || || ||| | | ||||| |||||| Sbjct 15165 AATGAAAATTTAGTTGAGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTC 15106 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 || || ||||| ||| ||||| || | || ||||| | || | | | || ||| Sbjct 15105 TATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGAT 15046 Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCG 61422 || ||||||| || | |||| ||||| || |||||||| || || || || || Sbjct 15045 ACTTACATCAAAGATCCAAAGGAAAGTGAATTCTTATTCAATGCAATTGAAACAATCCCA 14986 Query 61423 GCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTT 61482 | ||| || || || |||||||| || ||||| | || | || ||| Sbjct 14985 TGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAGATGCGTTGTTT 14926 Query 61483 GGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCC 61542 | || | ||| |||||||||| | || || ||| | || ||| ||| || ||||| Sbjct 14925 GCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCA 14866 Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 | ||||| |||||||| || | || | ||||| ||| |||| ||| ||| ||| || Sbjct 14865 TCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTG 14806 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTG 61662 || | | || || || | ||| ||||||||| |||||| || || || Sbjct 14805 ATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTTTCAC---AT--- 14752 Query 61663 GTGAATCGTCCGTCGGAGG---AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATC 61719 |||| | | | | || | | ||| | | || || || || || ||| Sbjct 14751 TTGAACCATACCCCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATT 14692 Query 61720 GAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTA 61779 ||| || ||| | |||||||| | || ||| | |||| |||||| | | Sbjct 14691 GAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTG 14632 Query 61780 ATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCG 61838 |||| |||||| | || |||||||| || | || || | | ||| || | |||| | Sbjct 14631 ATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAG 14572 Query 61839 GATCTATAATACG--AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896 | |||| ||| | ||| ||||| || || ||||| | ||||| || | ||| || Sbjct 14571 G---TATACGACGTTACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAA 14515 Query 61897 ACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 || || |||||||| || | || |||||| ||| Sbjct 14514 ACAAACTTTTTCGAAAAGAGAGTCTCCGACTACCAA 14479 >seq546 Length=22432 Score = 91.5 bits (100), Expect = 1e-13 Identities = 315/489 (64%), Gaps = 2/489 (0%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| || || || |||||| |||| ||| ||||| || ||||| || ||| Sbjct 10712 TCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGTC 10771 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTT-TGCATAATTCGGCTC 65196 |||| || |||| ||||||||||||| || | |||||| ||| || || | Sbjct 10772 TTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTT-GGATT 10830 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||| || |||| || || |||||| | ||| ||| | ||| |||||||| Sbjct 10831 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 10890 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 || || || | ||| ||||||||||| ||||| || | | | ||| Sbjct 10891 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTCCTTGATCTCTTG 10950 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||||| | | | || ||| | |||||| | || || || | || ||| || Sbjct 10951 AGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAGA 11010 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||| | |||| || | | || | | || | | | || | | ||||| Sbjct 11011 ATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGAA 11070 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 || |||| | || | | || || ||||| ||| ||||||||| |||| | Sbjct 11071 TTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGTT 11130 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 || ||||||||||| | || || ||||| ||||| || || || | |||||| |||| Sbjct 11131 GTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTCT 11190 Query 65557 CAATCCGTT 65565 ||| || || Sbjct 11191 CAAACCATT 11199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564758454160