Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4829 187 2e-42 seq5022 100 2e-16 >seq4829 Length=1098 Score = 187 bits (206), Expect = 2e-42 Identities = 394/587 (67%), Gaps = 3/587 (1%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 || || ||| ||||| | || ||||||| |||||||| ||||| ||||| || |||||| Sbjct 256 TTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGG 315 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGG- 61184 || | |||||| | ||| | |||||||| || |||| ||| | | || || || Sbjct 316 ACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAA 375 Query 61185 --TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 |||| | |||||| | || | ||||||||||| ||||| || ||||| ||| Sbjct 376 AATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTC 435 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| |||||| | || |||| | || || ||| | | ||||| |||||| Sbjct 436 AATGAAAATTTAGTTGAGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTC 495 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 || || ||||| ||| ||||| || | || ||||| | || | | | || ||| Sbjct 496 TATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGAT 555 Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCG 61422 || ||||||| || | |||| ||||| || |||||||| || || || || || Sbjct 556 ACTTACATCAAAGATCCAAAGGAAAGTGAATTCTTATTCAATGCAATTGAAACAATCCCA 615 Query 61423 GCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTT 61482 | ||| || || || ||||| || || ||||| | || | || ||| Sbjct 616 TGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAGATGCATTGTTT 675 Query 61483 GGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCC 61542 | || | ||| |||||||||| | || || ||| | || ||| ||| || ||||| Sbjct 676 GCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCA 735 Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 | ||||| |||||||| || | || | ||||| ||| |||| ||| ||| ||| || Sbjct 736 TCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTG 795 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATT 61649 || | | || || || | ||| ||||||||| |||||| || Sbjct 796 ATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTT 842 >seq5022 Length=2556 Score = 100 bits (110), Expect = 2e-16 Identities = 317/489 (65%), Gaps = 2/489 (0%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| || || || |||||| |||| ||| ||||| || ||||| || ||| Sbjct 2183 TCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGTC 2124 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTT-TGCATAATTCGGCTC 65196 ||||| || |||| ||||||||||||| || | |||||| ||| || || | Sbjct 2123 TTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTT-GGATT 2065 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||| || |||| || || |||||| | ||| ||| | ||| |||||||| Sbjct 2064 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 2005 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 || || || | ||| ||||||||||| ||||| || | | | ||| Sbjct 2004 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTCCTTGATCTCTTG 1945 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||||| | | | || ||| | |||||| | || || || | || ||| || Sbjct 1944 AGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAGA 1885 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||| | |||| || | | || | | || | | | |||| | ||||| Sbjct 1884 ATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGAA 1825 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 || |||| | || | | || || ||||| ||| ||||||||| |||| | Sbjct 1824 TTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGTT 1765 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 || ||||||||||| | || || ||||| ||||| || || || | |||||| |||| Sbjct 1764 GTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTCT 1705 Query 65557 CAATCCGTT 65565 ||| || || Sbjct 1704 CAAACCATT 1696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397539955056320