Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq215 235 9e-60 seq126 235 9e-60 seq120 235 9e-60 seq105 235 9e-60 seq100 235 9e-60 seq89 235 9e-60 seq67 235 9e-60 seq59 228 1e-57 >seq215 Length=3016 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 2262 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 2319 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 2320 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2379 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 2380 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 2439 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 2440 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 2499 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 2500 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 2546 >seq126 Length=5452 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 557 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 500 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 499 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 440 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 439 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 380 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 379 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 320 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 319 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 273 >seq120 Length=5699 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 795 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 738 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 737 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 678 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 677 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 618 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 617 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 558 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 557 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 511 >seq105 Length=6229 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 5858 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 5915 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 5916 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 5975 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 5976 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 6035 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 6036 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 6095 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 6096 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 6142 >seq100 Length=6357 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 5929 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 5986 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 5987 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 6046 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 6047 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 6106 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 6107 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 6166 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 6167 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 6213 >seq89 Length=6851 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 6553 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 6610 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 6611 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 6670 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 6671 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 6730 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 6731 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 6790 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 6791 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 6837 >seq67 Length=8702 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 8249 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 8306 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 8307 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 8366 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 8367 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 8426 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 8427 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 8486 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 8487 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 8533 >seq59 Length=11874 Score = 228 bits (252), Expect = 1e-57 Identities = 230/288 (80%), Gaps = 12/288 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 5186 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 5129 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 5128 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 5069 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 5068 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 5009 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 5008 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 4949 Query 232 CGGATTGCA-ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||| || ||| |||||| ||||||||||| |||| ||||| Sbjct 4948 CGGATGGCACATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 4901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197936640