Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq11 271 1e-70 seq9 271 1e-70 seq8 271 1e-70 seq1 271 1e-70 >seq11 Length=62431 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 8928 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 8985 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 8986 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 9045 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 9046 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 9103 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 9104 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 9156 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 20803 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 20860 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 20861 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 20920 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 20921 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 20978 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 20979 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 21031 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 32680 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 32737 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 32738 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 32797 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 32798 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 32855 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 32856 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 32908 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 44188 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 44245 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 44246 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 44305 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 44306 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 44363 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 44364 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 44416 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 55571 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 55628 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 55629 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 55688 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 55689 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 55746 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 55747 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 55799 >seq9 Length=441842 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 433483 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 433426 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 433425 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 433366 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 433365 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 433308 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 433307 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 433255 >seq8 Length=543103 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 280 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 337 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 338 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 397 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 398 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 455 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 456 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 508 >seq1 Length=2559104 Score = 271 bits (300), Expect = 1e-70 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 2550361 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 2550304 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 2550303 CTCGTTGAAGAGCAAAAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACGAGATT 2550244 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||||| | |||| | || | | ||||||||||||||||||| Sbjct 2550243 ACCCGGGCCTCTCGACCAAGGT--TGGACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 2550186 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 2550185 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTGTTGCCTCAAACTTCCATGG 2550133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999919865