Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq11 147 1e-33 seq9 147 1e-33 seq8 147 1e-33 seq1 147 1e-33 >seq11 Length=62431 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 9453 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 9508 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 9509 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 9565 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 21328 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 21383 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 21384 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 21440 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 33205 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 33260 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 33261 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 33317 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 44713 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 44768 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 44769 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 44825 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 56096 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 56151 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 56152 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 56208 >seq9 Length=441842 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 432958 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 432903 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 432902 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 432846 >seq8 Length=543103 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 805 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 860 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 861 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 917 >seq1 Length=2559104 Score = 147 bits (162), Expect = 1e-33 Identities = 104/117 (89%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | |||| | | || | ||| Sbjct 2549836 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGG-CAAAGT---AGCACCACCC 2549781 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 2549780 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 2549724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399971290