Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq11 342 9e-92 seq9 342 9e-92 seq8 342 9e-92 seq1 342 9e-92 >seq11 Length=62431 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 9824 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 9765 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 9764 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 9705 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 9704 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 9645 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 9644 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 9585 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 9584 A-AGAACGAAAGTTAGGGG 9567 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 21699 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 21640 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 21639 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 21580 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 21579 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 21520 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 21519 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 21460 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 21459 A-AGAACGAAAGTTAGGGG 21442 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 33576 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 33517 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 33516 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 33457 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 33456 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 33397 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 33396 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 33337 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 33336 A-AGAACGAAAGTTAGGGG 33319 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 45084 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 45025 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 45024 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 44965 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 44964 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 44905 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 44904 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 44845 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 44844 A-AGAACGAAAGTTAGGGG 44827 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 56467 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 56408 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 56407 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 56348 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 56347 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 56288 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 56287 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 56228 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 56227 A-AGAACGAAAGTTAGGGG 56210 >seq9 Length=441842 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Plus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 432587 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 432646 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 432647 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 432706 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 432707 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 432766 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 432767 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 432826 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 432827 A-AGAACGAAAGTTAGGGG 432844 >seq8 Length=543103 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1176 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 1117 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1116 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 1057 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 1056 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 997 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 996 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 937 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 936 A-AGAACGAAAGTTAGGGG 919 >seq1 Length=2559104 Score = 342 bits (378), Expect = 9e-92 Identities = 232/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Plus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 2549465 GGCGAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGA 2549524 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2549525 TATATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC 2549584 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||| Sbjct 2549585 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATT 2549644 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 2549645 CTTGGATTGACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 2549704 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 2549705 A-AGAACGAAAGTTAGGGG 2549722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199899328