Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq11 268 1e-69 seq9 268 1e-69 seq8 268 1e-69 seq1 268 1e-69 >seq11 Length=62431 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 9071 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 9130 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 9131 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 9188 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 9189 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 9247 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 9248 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 9307 Query 240 A 240 | Sbjct 9308 A 9308 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 20946 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 21005 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 21006 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 21063 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 21064 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 21122 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 21123 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 21182 Query 240 A 240 | Sbjct 21183 A 21183 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 32823 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 32882 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 32883 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 32940 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 32941 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 32999 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 33000 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 33059 Query 240 A 240 | Sbjct 33060 A 33060 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 44331 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 44390 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 44391 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 44448 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 44449 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 44507 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 44508 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 44567 Query 240 A 240 | Sbjct 44568 A 44568 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 55714 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 55773 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 55774 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 55831 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 55832 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 55890 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 55891 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 55950 Query 240 A 240 | Sbjct 55951 A 55951 >seq9 Length=441842 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 433340 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 433281 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 433280 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 433223 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 433222 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 433164 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 433163 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 433104 Query 240 A 240 | Sbjct 433103 A 433103 >seq8 Length=543103 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 423 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 482 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 483 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 540 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 541 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 599 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 600 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 659 Query 240 A 240 | Sbjct 660 A 660 >seq1 Length=2559104 Score = 268 bits (296), Expect = 1e-69 Identities = 206/241 (85%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2550218 ACTTGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 2550159 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||| ||||||||||||||||| || | || || ||||||||||||||||| ||| Sbjct 2550158 CCTGTTGTTGCCTCAAACTTCCATGGGTTTGATACCCATAGTCCCTCTAAGAAG--AGCA 2550101 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || ||| | |||||||||||||||||||||||| |||||||| |||| Sbjct 2550100 CCCGAGCAGATGCTCG-CAGCCCTATTTAGCAGGTTAAGGTCTCGTCCGTTATCGCAATT 2550042 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||| ||||| ||||||||||||||||||||| || |||||| Sbjct 2550041 AAGCAGACAAATCACTCCAAGGACTAAAAACGGCCATGCACCACCACCCGTAAGATCAAG 2549982 Query 240 A 240 | Sbjct 2549981 A 2549981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799915091