Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq11 224 1e-56
seq9 224 1e-56
seq8 224 1e-56
seq1 224 1e-56
>seq11
Length=62431
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 9821 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 9762
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 9761 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 9703
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 9702 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 9643
Query 182 TGGATT 187
||||||
Sbjct 9642 TGGATT 9637
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 21696 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 21637
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 21636 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 21578
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 21577 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 21518
Query 182 TGGATT 187
||||||
Sbjct 21517 TGGATT 21512
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 33573 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 33514
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 33513 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 33455
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 33454 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 33395
Query 182 TGGATT 187
||||||
Sbjct 33394 TGGATT 33389
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 45081 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 45022
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 45021 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 44963
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 44962 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 44903
Query 182 TGGATT 187
||||||
Sbjct 44902 TGGATT 44897
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 56464 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 56405
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 56404 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 56346
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 56345 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 56286
Query 182 TGGATT 187
||||||
Sbjct 56285 TGGATT 56280
>seq9
Length=441842
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 432590 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 432649
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 432650 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 432708
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 432709 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 432768
Query 182 TGGATT 187
||||||
Sbjct 432769 TGGATT 432774
>seq8
Length=543103
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 1173 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 1114
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1113 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 1055
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 1054 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 995
Query 182 TGGATT 187
||||||
Sbjct 994 TGGATT 989
>seq1
Length=2559104
Score = 224 bits (248), Expect = 1e-56
Identities = 162/186 (87%), Gaps = 1/186 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 2549468 GAACCAGGACGATTACTTTGAGGAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATAT 2549527
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 2549528 ATTAGCATGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-AT 2549586
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| |||||||||| | |||| ||||||||||||
Sbjct 2549587 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTCGTCAGAGGTGAAATTCT 2549646
Query 182 TGGATT 187
||||||
Sbjct 2549647 TGGATT 2549652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511999945440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |