Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq11 235 9e-60 seq9 235 9e-60 seq1 235 9e-60 >seq11 Length=62431 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 5355 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 5298 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 5297 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 5238 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 5237 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 5178 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 5177 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 5118 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 5117 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 5071 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 17230 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 17173 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 17172 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 17113 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 17112 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 17053 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 17052 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 16993 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 16992 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 16946 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 29107 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 29050 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 29049 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 28990 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 28989 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 28930 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 28929 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 28870 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 28869 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 28823 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 40616 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 40559 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 40558 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 40499 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 40498 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 40439 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 40438 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 40379 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 40378 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 40332 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 51998 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 51941 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 51940 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 51881 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 51880 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 51821 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 51820 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 51761 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 51760 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 51714 >seq9 Length=441842 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 437056 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 437113 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 437114 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 437173 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 437174 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 437233 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 437234 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 437293 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 437294 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 437340 >seq1 Length=2559104 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 2553933 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 2553990 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 2553991 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2554050 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAATAGG---CTTCGGCC 174 ||||| | |||| || ||| |||||| || ||||||||||| | || |||| Sbjct 2554051 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATACGAATAAGGCCCTGTGGCC 2554110 Query 175 -CCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||| ||||||||||||| ||| ||| |||||| || | | | | || || Sbjct 2554111 GCAGAACCGTAGCAGGCCGGCAGCGGTGCGCATGGCGGAAAGGCCGTGTGTGCTTGCCGG 2554170 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| ||||||||||| |||| ||||| Sbjct 2554171 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTATGCATACGAC 2554217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199912704