Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq208 600 5e-169 >seq208 Length=5958 Score = 600 bits (664), Expect = 5e-169 Identities = 534/656 (81%), Gaps = 18/656 (3%) Strand=Plus/Plus Query 37 GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTA 96 |||||||||||||||||||||||||||||| || |||| |||||||| | ||||| |||| Sbjct 2619 GACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAGTGGGTGGTAAATTCCATCTAAGGCTA 2678 Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 |||| |||| |||||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct 2679 AATACTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTTTG 2738 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGC 216 ||||||||| ||| |||||||||||||||||||||||||| | | || ||| || Sbjct 2739 AAAAGAGAGTGAAACAGCACGTGAAATTGTTGAAAGGGAAGGGTATTGGGCCCGACATGG 2798 Query 217 CCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCA---GGCCAGCA 272 | ||| || || | | | | || | | || |||| ||| || |||||||| Sbjct 2799 --GGAGT-GCGCACCGCTGTCTCTTGTAGGCGGCGCTCTGG-GCGCTCTCTGGGCCAGCA 2854 Query 273 TCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAG 332 || | | || | ||| || || | |||| ||||| | ||||| | |||||||| Sbjct 2855 TCGGTTTTTGCTGCGGGAGAATGGGTGCCGGAAAGTGGCTC--TTCGGAG--TGTTATAG 2910 Query 333 CCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGC 390 || | | || | | || || |||| |||| | ||| || | || |||||||||| Sbjct 2911 CCGGCGCCAGA-TACCGCGTGCGGGGACCGAGGACTGCGGCTTCTGTCTCGGATGCTGGC 2969 Query 391 GTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAG 450 || || | | |||||||||| |||| ||||||||||||||||| |||||||||| Sbjct 2970 ACAACGGCGCAATACCGCCCGTCTTGAAACATGGACCAAGGAGTCTAACGTCTATGCGAG 3029 Query 451 TGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT--GAG 508 ||||||||||| |||||||| ||||||||||||||||||| |||| ||| ||| | | | Sbjct 3030 TGTTTGGGTGTGAAACCCGTACGCGTAATGAAAGTGAACGTAGGTCGGACCCCTTTCGGG 3089 Query 509 GGTGCACCATCGACCGATCCTGATGTCT-TCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 || |||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 3090 GGGGCACGATCGACCGATCCTGATGTTTATCGGATGGATTTGAGTAAGAGCATAGCTGTT 3149 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3150 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 3209 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 3210 AGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 3265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079988803100