Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq208 600 5e-169
>seq208
Length=5958
Score = 600 bits (664), Expect = 5e-169
Identities = 534/656 (81%), Gaps = 18/656 (3%)
Strand=Plus/Plus
Query 37 GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTA 96
|||||||||||||||||||||||||||||| || |||| |||||||| | ||||| ||||
Sbjct 2619 GACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAGTGGGTGGTAAATTCCATCTAAGGCTA 2678
Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
|||| |||| |||||||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct 2679 AATACTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTTTG 2738
Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGC 216
||||||||| ||| |||||||||||||||||||||||||| | | || ||| ||
Sbjct 2739 AAAAGAGAGTGAAACAGCACGTGAAATTGTTGAAAGGGAAGGGTATTGGGCCCGACATGG 2798
Query 217 CCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCA---GGCCAGCA 272
| ||| || || | | | | || | | || |||| ||| || ||||||||
Sbjct 2799 --GGAGT-GCGCACCGCTGTCTCTTGTAGGCGGCGCTCTGG-GCGCTCTCTGGGCCAGCA 2854
Query 273 TCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAG 332
|| | | || | ||| || || | |||| ||||| | ||||| | ||||||||
Sbjct 2855 TCGGTTTTTGCTGCGGGAGAATGGGTGCCGGAAAGTGGCTC--TTCGGAG--TGTTATAG 2910
Query 333 CCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGC 390
|| | | || | | || || |||| |||| | ||| || | || ||||||||||
Sbjct 2911 CCGGCGCCAGA-TACCGCGTGCGGGGACCGAGGACTGCGGCTTCTGTCTCGGATGCTGGC 2969
Query 391 GTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAG 450
|| || | | |||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct 2970 ACAACGGCGCAATACCGCCCGTCTTGAAACATGGACCAAGGAGTCTAACGTCTATGCGAG 3029
Query 451 TGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT--GAG 508
||||||||||| |||||||| ||||||||||||||||||| |||| ||| ||| | | |
Sbjct 3030 TGTTTGGGTGTGAAACCCGTACGCGTAATGAAAGTGAACGTAGGTCGGACCCCTTTCGGG 3089
Query 509 GGTGCACCATCGACCGATCCTGATGTCT-TCGGATGGATTTGAGTAAGAGCATAGCTGTT 567
|| |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 3090 GGGGCACGATCGACCGATCCTGATGTTTATCGGATGGATTTGAGTAAGAGCATAGCTGTT 3149
Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3150 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 3209
Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 3210 AGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 3265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079988803100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |