Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq208 226 5e-57
>seq208
Length=5958
Score = 226 bits (250), Expect = 5e-57
Identities = 229/289 (79%), Gaps = 13/289 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| ||||||||||||||| ||| || |
Sbjct 5323 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGCGGCTGTCTGAGCAGACACT 5380
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 5381 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 5440
Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAAT-AGGC-----TTCG 171
||||| | |||| || ||| |||||| || ||||| |||| |||| || |
Sbjct 5441 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATAAGAATAAGGCCCTTGTTGG 5500
Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCT 229
| | ||||| ||| ||||||||| ||| ||| |||||| || | | | | ||
Sbjct 5501 CCGCAGAACCGTAGTAGGCCGGCAGCGGTGCGCGTGGCGGAAAGGCTGCGTGTGCTTGCC 5560
Query 230 GGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| ||||| ||| |||||| ||||||||||||||||||||||
Sbjct 5561 GGCGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTTTGCAGACGAC 5609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819195857408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |