Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq208 226 5e-57 >seq208 Length=5958 Score = 226 bits (250), Expect = 5e-57 Identities = 229/289 (79%), Gaps = 13/289 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||||||||||||| ||| || | Sbjct 5323 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGCGGCTGTCTGAGCAGACACT 5380 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 5381 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 5440 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAAT-AGGC-----TTCG 171 ||||| | |||| || ||| |||||| || ||||| |||| |||| || | Sbjct 5441 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATAAGAATAAGGCCCTTGTTGG 5500 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCT 229 | | ||||| ||| ||||||||| ||| ||| |||||| || | | | | || Sbjct 5501 CCGCAGAACCGTAGTAGGCCGGCAGCGGTGCGCGTGGCGGAAAGGCTGCGTGTGCTTGCC 5560 Query 230 GGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| ||||| ||| |||||| |||||||||||||||||||||| Sbjct 5561 GGCGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTTTGCAGACGAC 5609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819195857408