Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq208 702 0.0 seq41 77.0 1e-11 >seq208 Length=5958 Score = 702 bits (778), Expect = 0.0 Identities = 462/505 (91%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| || |||||||||| ||| |||||||||||||| Sbjct 714 GTACTCATTCCAATTACAAGACC---AATGGCCCTGTATCGTTATATATTGTCACTACCT 658 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 598 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| Sbjct 597 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTGAAAACCATGGTA 538 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA-TCGCCGGC 239 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 537 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCCGCCGGC 478 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 |||||||||| | |||| |||||||||||||||| ||| || |||| ||||| ||| Sbjct 477 ACAAGGCCATGGGCTTCGAAAAGTTATTATGAATCATCAA-AAGGCCCG-AGGGCATTGA 420 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| Sbjct 419 TTTTTTATCTAATAAATACACCCCTCCCGAAGTCGGGGCTTTACGCATGTATTAGCTCTA 360 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 || || |||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct 359 GATTTTCCACGGTTATCCATGTAGAACGGAACTATCAAATAAACGATAACTGATTTAATG 300 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 299 AGCCATTCGCAGTTTCACCGTAT--AATGCTTATACTTAGACATGCATGGCTTAATCTTT 242 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 241 GAGACAAGCATATGACTACTGGCAG 217 >seq41 Length=117864 Score = 77.0 bits (84), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 254 TTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATA 313 |||| |||||||||||||||| ||| || ||||| |||| ||| |||||||||||||| Sbjct 802 TTCGAAAAGTTATTATGAATCATCAAA-AGGCCCGA-GGGCATTGATTTTTTATCTAATA 859 Query 314 AATACACCC 322 ||||||||| Sbjct 860 AATACACCC 868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510392115712