Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq208 702 0.0
seq41 77.0 1e-11
>seq208
Length=5958
Score = 702 bits (778), Expect = 0.0
Identities = 462/505 (91%), Gaps = 8/505 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||| || |||||||||| ||| ||||||||||||||
Sbjct 714 GTACTCATTCCAATTACAAGACC---AATGGCCCTGTATCGTTATATATTGTCACTACCT 658
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 598
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct 597 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTGAAAACCATGGTA 538
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA-TCGCCGGC 239
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 537 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCCGCCGGC 478
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
|||||||||| | |||| |||||||||||||||| ||| || |||| ||||| |||
Sbjct 477 ACAAGGCCATGGGCTTCGAAAAGTTATTATGAATCATCAA-AAGGCCCG-AGGGCATTGA 420
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||
Sbjct 419 TTTTTTATCTAATAAATACACCCCTCCCGAAGTCGGGGCTTTACGCATGTATTAGCTCTA 360
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
|| || |||||||||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct 359 GATTTTCCACGGTTATCCATGTAGAACGGAACTATCAAATAAACGATAACTGATTTAATG 300
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||
Sbjct 299 AGCCATTCGCAGTTTCACCGTAT--AATGCTTATACTTAGACATGCATGGCTTAATCTTT 242
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 241 GAGACAAGCATATGACTACTGGCAG 217
>seq41
Length=117864
Score = 77.0 bits (84), Expect = 1e-11
Identities = 60/69 (87%), Gaps = 2/69 (3%)
Strand=Plus/Plus
Query 254 TTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATA 313
|||| |||||||||||||||| ||| || ||||| |||| ||| ||||||||||||||
Sbjct 802 TTCGAAAAGTTATTATGAATCATCAAA-AGGCCCGA-GGGCATTGATTTTTTATCTAATA 859
Query 314 AATACACCC 322
|||||||||
Sbjct 860 AATACACCC 868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392115712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |