Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq183 280 1e-70 seq95 123 2e-23 seq30 95.1 1e-14 >seq183 Length=27355 Score = 280 bits (310), Expect = 1e-70 Identities = 606/882 (69%), Gaps = 32/882 (4%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| ||| |||| | || || |||| |||||||| ||||| || || || || ||| Sbjct 25934 TTCCCGATCAAGTACCACGAGATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTGG 25993 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGG---GAGCGTTT-ATCGAG 61181 || | |||||| ||||| | || || ||| || | |||||| ||| | || | ||| Sbjct 25994 ACCGCCGAGGAGATCGATCTCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGA- 26052 Query 61182 CGGTGAACAACATTTCAT-TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCG 61240 | || | | ||||| | | | ||||||||||||||||||||||||||||| || | Sbjct 26053 CAACGAGAGATACTTCATCTCGAGA-GTGTTGGCGTTCTTTGCCGCTTCGGACGGGATTG 26111 Query 61241 TCAATGAGAATTTATTG--GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTG 61298 | || ||||| || || |||| | || |||| |||||||| ||| ||||||| || Sbjct 26112 TGAACGAGAACTTGGTGGAGAACTTCTC-CGCA-GAGGTGCAGGTGCCGGAGGCAAAGTG 26169 Query 61299 TTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCAT 61358 ||||||||| |||||||| |||||||| |||||||||||| |||| | | || Sbjct 26170 TTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGTTGTTGAT 26229 Query 61359 CGATACGTACATCAGGGAGCGG--GCGGAACGTGAACGATTGTTCAATGCCATCGAGACG 61416 ||| |||||| | | ||| | | | ||||| | || | ||||| || ||||| | Sbjct 26230 CGACACGTACGTGAAGGATCCGAAGGAGAACGAGTAC--CTCTTCAACGCGATCGATAAC 26287 Query 61417 ATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACG--G 61474 || ||| | ||| ||| || || ||||| ||| ||||||| | |||| | | Sbjct 26288 ATCCCGTGCATCAAGGAGAAGGCCGAGTGGGCGCTCAGATGGATCA--ACGACAAGGATG 26345 Query 61475 CTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGAT 61534 | ||||| || || ||| |||| ||||| | || ||||| | || ||| || | Sbjct 26346 CGTTGTTTGGCGAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCT 26405 Query 61535 CGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCA 61594 ||||||| | ||||| ||||||||||| || || || |||||||| |||| ||| | Sbjct 26406 CGTTTGCGTCGATCTTCTGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGA 26465 Query 61595 ATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC 61654 | |||||||| | || ||||||||| |||| || ||||| ||| | ||| | Sbjct 26466 ACGAGTTGATCTGTCGGGACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTTC--TC 26523 Query 61655 GCTATCTGGTGAATCGTCCGTCGGAGGAG-CG--TGTGGGTGAGATTGTTCGTGAGGCGG 61711 || | | ||||| | |||| ||| || ||| | |||| | ||||| | Sbjct 26524 GC-ACC---TGAATAACACCCCGGACGAGACGATTGTCCGCAAGATCATCACCGAGGCCG 26579 Query 61712 TAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATT 61771 | |||||| || | | |||||||| ||||||||| | | |||||||| Sbjct 26580 TTGATATCGAGAAGCGCTACTTCACTGACGCCTTGCCCGTCAACTTGTTGGGCATGAA-C 26638 Query 61772 GTGGAC-TAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGG 61829 |||| | |||| ||||| | || ||||| |||||||| |||| |||| | || Sbjct 26639 AAGGACTTGATGTGCCAGTACGTCGAGTTTGTCGCCGACCGCTTGTTTGTCGCCCTCGGC 26698 Query 61830 TATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGA 61889 | || | | ||| || | |||||||| ||||||||||| | |||||||| | Sbjct 26699 TGCGACAAGCA-CTACAACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGC 26757 Query 61890 TGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 ||||| || || || |||||||| || || ||||||||| Sbjct 26758 CGGCAAAACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCA 26799 >seq95 Length=34527 Score = 123 bits (136), Expect = 2e-23 Identities = 476/742 (64%), Gaps = 12/742 (2%) Strand=Plus/Minus Query 66095 CCCAAATTCTGTTGATTAC-TCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||||| |||||||| || | ||| | || ||||| |||||||| | |||| | ||||| Sbjct 1594 CCCAAGTTCTGTTGGTTGGATTTTGTG-TTACATGCGTCCTTGTAGAGCATGAAAGGAGT 1536 Query 66154 GCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACG 66213 || || ||| ||||| || | ||| | || ||| | ||||||| | || | Sbjct 1535 ACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGT-CT 1477 Query 66214 TACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATA 66272 | | || || || | |||||| | | || || | |||||| ||||| | | Sbjct 1476 TTCTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGA 1417 Query 66273 CTTCGGACAGACATGGA----CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 | ||||||| | ||| |||||| | || | || | ||| || || ||| Sbjct 1416 CGTCGGACAAGCCTGGGACCTCACTTGGGGAGAAA----AGAGTCCATTCCTGATTCTGC 1361 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || || | ||| || | ||||||||||| | || ||| | || | |||| Sbjct 1360 TCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTG 1301 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 || || | ||||| || || | || ||||| ||| || ||||| |||| |||||| Sbjct 1300 ATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCAT 1241 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || || || |||| || || | || | |||| |||||||||||||| || | Sbjct 1240 GGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTG 1181 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 || |||||||| ||||||| ||| || | || ||||| || | || ||||| || Sbjct 1180 GCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCT 1121 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 | ||| ||| ||| || | || | ||| | | || |||||||||||| || ||| Sbjct 1120 GCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTC 1061 Query 66629 TTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTG 66688 || ||||| ||||| | || || | | || || ||||| || ||| | | Sbjct 1060 TTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGC 1001 Query 66689 ATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTG 66748 || | | | | | || || | ||| | | || || | || ||| | ||| Sbjct 1000 ATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTA 941 Query 66749 GGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCA 66808 || | |||||| || ||||| |||||| | ||||| ||||||||| | ||| Sbjct 940 GGAGAAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCA 881 Query 66809 ATGTTTTCGCCATGAATCCCGA 66830 |||| ||||| ||||| |||| Sbjct 880 ATGTCGTCGCCGTGAATACCGA 859 Score = 89.7 bits (98), Expect = 4e-13 Identities = 319/491 (65%), Gaps = 6/491 (1%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || ||||| || |||||| || | ||| || || |||||||| || || Sbjct 2600 ATCAACTGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGT 2541 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCGGCT 65195 ||| | || |||| | ||||| |||||||| | || || | || || || | Sbjct 2540 CTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTT 2481 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | | | || || |||| |||||| ||| |||||||| ||| | || || |||| Sbjct 2480 CTTCAAG-TGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCGCCA 2422 Query 65256 TGTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 |||| ||||| || | || | ||||||||||||||||| |||| | | || Sbjct 2421 TGTCGATGAT-CGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTCCTTGATTTCC 2363 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACC-ACGACGTGCAATAATGCGATTACGCAT 65373 ||| || | || || ||||| ||||| | || | || ||| | || ||| Sbjct 2362 TGTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTCG-GAGATGATGTGGTTCTTCAT 2304 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433 || || ||| | |||| || | | | | | || || | || | | || Sbjct 2303 AGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCTG 2244 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 |||||| |||| || || | | |||||||| || ||| || || || |||| Sbjct 2243 GAACTCACCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTC 2184 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 ||| || ||||| || | || || ||||||||||| || || |||||||| ||||| Sbjct 2183 GTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGTT 2124 Query 65554 TCGCAATCCGT 65564 || ||| |||| Sbjct 2123 TCTCAACCCGT 2113 >seq30 Length=26055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65422 ATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGG 65481 ||||| ||||| || || || | ||| ||||||||||| || ||||| || || || Sbjct 2196 ATTGACTACTTGATGTTCTCCTGATAATACTCGACGGACATATATATTGGATGTAATAGG 2255 Query 65482 TTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGAC 65541 |||||| ||||| || || |||||||||| ||| |||||||||||||| ||||| Sbjct 2256 CTCAAAGCATTCATTGAAACCGAGAATTTGGGAAGTTGATGCAGTTGGCATCAAGGCGAC 2315 Query 65542 CAACAATGAGTTTCGCA 65558 | || ||||||| || Sbjct 2316 AAGTAAAGAGTTTCTCA 2332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565470722080