Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq3 226 5e-57
>seq3
Length=1410883
Score = 226 bits (250), Expect = 5e-57
Identities = 228/287 (79%), Gaps = 12/287 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| ||||||
Sbjct 97 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 154
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 155 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 214
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAAT-AGGC---TTCGGCCC 175
||| | | ||||||| ||| |||||| |||| |||||||||| |||| || | |
Sbjct 215 GAAAGCGATGATTCTTGCCTCGCACATTTTAGTTGGATACGAATAAGGCTCTTTGAGTCG 274
Query 176 CGA-ACCTTAGCAGGCCGGCAACGG---GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGG 231
| | ||| |||||||| ||||| || | | || | | | | ||| || ||
Sbjct 275 CTAGACCATAGCAGGCTGGCAATGGTACACTTATCGGAAAGGATTTGTGTGCT-TGCCGG 333
Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| || ||||| ||| ||||||| ||||||||||||||||| |||||
Sbjct 334 CGAATAGCAATGTCATCATGCGCGGGGATAAATCCTTTGCATACGAC 380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199928576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |