Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3 226 5e-57 >seq3 Length=1410883 Score = 226 bits (250), Expect = 5e-57 Identities = 228/287 (79%), Gaps = 12/287 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| Sbjct 97 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 154 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 155 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 214 Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAAT-AGGC---TTCGGCCC 175 ||| | | ||||||| ||| |||||| |||| |||||||||| |||| || | | Sbjct 215 GAAAGCGATGATTCTTGCCTCGCACATTTTAGTTGGATACGAATAAGGCTCTTTGAGTCG 274 Query 176 CGA-ACCTTAGCAGGCCGGCAACGG---GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGG 231 | | ||| |||||||| ||||| || | | || | | | | ||| || || Sbjct 275 CTAGACCATAGCAGGCTGGCAATGGTACACTTATCGGAAAGGATTTGTGTGCT-TGCCGG 333 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || || ||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct 334 CGAATAGCAATGTCATCATGCGCGGGGATAAATCCTTTGCATACGAC 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199928576