Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 187 2e-42 >seq3 Length=1410883 Score = 187 bits (206), Expect = 2e-42 Identities = 592/913 (65%), Gaps = 10/913 (1%) Strand=Plus/Plus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 |||| || ||||| || ||| |||||||||| || ||||| || ||| ||| | | Sbjct 928538 ATGAGCCATTATTGATTGAAAATGCTCGTCGTTTTGTTTTGTTTCCAATCAGATATCACG 928597 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 | || |||| ||||||||||| || || ||||| || ||||| | ||||| | || | Sbjct 928598 AAATCTGGCAAATGTACAAAAAAGCTGAGGCTTCATTTTGGACTGCTGAGGAAATTGACT 928657 Query 61145 TGTCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATT 61200 || || ||| || |||||||| || ||| | || | |||| ||||||| Sbjct 928658 TGGGTAAGGACTTGCATGACTGGAAGGACAAGTTAAATGA-CAATGAAAGGTTTTTCATT 928716 Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 | | || || |||||||| || || || ||||| ||||| ||||| || | || Sbjct 928717 TCAAGAATCTTAGCTTTCTTTGCTGCATCTGATGGTATTGTCAACGAGAACTTGGTTGAG 928776 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 |||| | || || ||||| | || || || || || || || || || Sbjct 928777 AATTTCTCAGCTGAAGTTCAAGTTCCAGAAGCCAAATGCTTTTATGGATTTCAAATCATG 928836 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 ||||||||| ||||||| || | ||| | | | || ||||| || |||| ||| | Sbjct 928837 ATGGAGAATATCCACTCAGAAACCTACTCTTTATTGATTGATACCTATATCAAGGATCCA 928896 Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 || ||| ||||| ||||| || || | || || | ||| ||| || Sbjct 928897 AAAGAGGCTGACTTTTTGTTTAATGCAATTGACAACATTCCATGTATCAAGAAGAAGGCT 928956 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500 || ||||| || | ||||||| | | | || ||| |||||||| | | || Sbjct 928957 GACTGGGCTTTGAGATGGATCAACGATGAAGATGCATTATTCGGTGAACGTCTTGTTGCT 929016 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | || |||||| | || |||||||| || ||||| | ||||| ||||||||| Sbjct 929017 TTCGCTGCTGTTGAGGGTATTTTCTTCAGTGGTTCATTTGCATCTATCTTCTGGTTGAAG 929076 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || | || | ||||| ||||| || ||| || || ||||| | | || || || Sbjct 929077 AAGAGAGGTATGATGCCAGGTCTTACATTCTCTAACGAATTGATTTGCAGAGATGAAGGT 929136 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680 | ||| ||| |||||| || | ||| | || || || | || | Sbjct 929137 TTACATACTGACTTTGCTTGCTTATTGTTCTCTC---ATTTGCAAAACAGACCAGATGCA 929193 Query 61681 GAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGAC 61740 || ||| | |||| | || || || || || ||| |||||||| | || || Sbjct 929194 GAAATTGTTGAGAGGATTATCACCGAAGCCGTTACCATTGAAAAGGAATTTTTCACCGAT 929253 Query 61741 GCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTT 61800 || || || ||||| | | || |||||| | | | |||| || ||| | |||||| Sbjct 929254 GCATTACCTGTCTCTTTGTTGGGTATGAATAGCAGCTTGATGTGTCAATATGTCGAATTT 929313 Query 61801 GTTGCCGACCGTCTGTTGGTCGATTTGGGT-ATGAAGCGGATCTATAATACGAAAAACCC 61859 ||||| || | | || || | ||||||| | ||| || | || ||| | ||| || Sbjct 929314 GTTGCAGATAGATTATTAGTTGCTTTGGGTAACGAAAAGG-TGTACAATGTTACAAATCC 929372 Query 61860 ATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||||||||||| | || || ||| ||| || || || ||||| || || | || Sbjct 929373 TTTTGATTTCATGGAAAACATCTCCTTGGCTGGTAAAACCAACTTTTTTGAAAAGAGAGT 929432 Query 61920 AGGCGACTATCAA 61932 | ||||||||| Sbjct 929433 CAGTGACTATCAA 929445 Score = 156 bits (172), Expect = 3e-33 Identities = 357/534 (67%), Gaps = 4/534 (1%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| ||| |||||| |||| ||| || | |||||||| |||||| Sbjct 803347 TCGACAGTGAACTGGATAGCAGCAGCAGCAGCCTGGGTTCTCAAGTAGTACATACCGGTC 803288 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || |||| | |||||||||||||| | || || | | || || Sbjct 803287 TTCAACCCCTTCTTCCAACCGTAGAAATGCATCGAGGTCAACTTGCCCATGGTAGGGTCT 803228 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 | || || || | |||||| || |||||| || | | || || |||||| Sbjct 803227 TTGATGTGAATGTTGAGCGACTGTGATTGGTCGATGAAAGCAGATCTGTCGGCTGCCATG 803168 Query 65258 TCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATT 65317 || |||||| | | ||||||||||| ||||| ||||||| | | |||| | Sbjct 803167 TCGATGATATGCTTTTGGGATATCTCCCACACGGTTTTGTACAATTGTTTGAGCTCATCT 803108 Query 65318 GGAATCTCCT-CAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||||| | ||| | |||| ||||| | || ||| || ||| ||| Sbjct 803107 GGAATGTTGGGCAACGAT-TGGATCGAACCGTTATTTGAAATGATATTATTTTTCATATT 803049 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||| | |||||||| || | || | | ||||| | |||| | |||||| Sbjct 803048 GTCGTTCCAAAGACCCAAATTGACCAAATCCTTCAACAAGTATGGGTTGACTATTTGGAA 802989 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 ||| || | || ||| | | |||||||| || ||| || |||||| |||| | Sbjct 802988 CTCACCAGCCAATACTCTTCTCGAGTAGATGTTCGAAGTGTATGGCTCAAAGCATTCGTT 802929 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 |||||||| |||||| | || || ||||| ||||| ||||| || | ||||||||||| Sbjct 802928 GTTGCCTAAAATTTGCGAGGTGGACGCAGTAGGCATAGGAGCAACAAGCAATGAGTTTCT 802869 Query 65557 CAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGT 65608 ||| || | | || | ||||| || |||| |||||||| ||||| ||||| Sbjct 802868 CAAACCATGCTTTGCCATGTTTTGCTTCAATGTGTCCCAGTCCCACAATTCGGT 802815 Score = 152 bits (168), Expect = 4e-32 Identities = 594/930 (64%), Gaps = 4/930 (0%) Strand=Plus/Minus Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 |||||| | ||| || ||||| | ||| || ||||| | || || ||||| ||| || Sbjct 802424 AGATGCCAAGTTACATACAGCAACCTCATCTGGAGCAGAGTATTCAACAATCTCGCAACA 802365 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 || ||| | || | |||||||||| ||| ||| |||| || |||||||| Sbjct 802364 CAAATTGGATGATTTAATAATACCCAAATTCTTTTGGTTAGTCTTCTTGTTACATGCATC 802305 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 || || | |||| | ||||| || ||||| ||| | ||| | ||| || | ||| | Sbjct 802304 TTTATAAAGCATGAATGGAGTACCTGTCTCTGTTTGAGCCTCTAAGATAGCATACCATAA 802245 Query 66193 AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | ||||| || || || | | || | |||||| | |||||| | | Sbjct 802244 CTTCTGAGCCTTGACGGTCTGTCTTCCACGGTTTTCTCTTTCGTATTTTTCGTACAACTC 802185 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 |||||| || || || || | || | |||| | | || | | || | Sbjct 802184 TTCGAACTCATCGCCGAATTTGTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGT 802125 Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||| || || || ||||| | ||| || | |||||| ||||| | || || Sbjct 802124 CCATTCTTTATTTTGCTCTACTCTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAA 802065 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 | || | |||| | || || | |||||||| || | | ||| | ||| ||||| Sbjct 802064 TAAGTCTCTGGCTCTGTTTTCTTCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAA 802005 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 || || |||||||||||||| | ||| | || || | || | |||| ||||| Sbjct 802004 AATATCTGCATGCCATGGTTCGATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACC 801945 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 ||| || ||||| ||||| ||||| ||||| || | ||| || | | ||||| || Sbjct 801944 TTGATCCACGTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGA 801885 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612 | || ||||| ||| | ||| || || || || |||| || | | || ||| Sbjct 801884 GGTACCGTTGGTTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAACC 801825 Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGCCAC-TGTCCGGAATATGCCG 66670 ||||||||| || |||| || || |||||| || | || |||| | || ||| Sbjct 801824 AATACCACCAGCACTCTTGGAAATCAAAGCACACGTCTTCAACGTGTC--ATAGATACCG 801767 Query 66671 TCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTG 66730 || |||||||| |||| |||| | | | |||| ||| | ||| |||| ||||| Sbjct 801766 TCGATGGAGTCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTA 801707 Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790 | || ||| | ||| || | ||| || || ||||| |||||||||||||||| Sbjct 801706 CCAGCATTGAACAAGGTTGGGGAAGCATGTGTGAAGTATCTTTGAGACATGTAATTGTAA 801647 Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGG 66850 ||||| || || || | || | |||||| || | ||| || ||| | | | Sbjct 801646 GTCTCAATAACCCGTGGGATATCATCTCTATGAATACCAATAGCAACTCTCATAATCAAG 801587 Query 66851 TATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTC 66910 | |||||| | ||| | | | | | | | | || |||||| || | || | ||| Sbjct 801586 TGTTGAGGTCTCTCGGCAACCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTC 801527 Query 66911 TTGATACCAAAGTACGAGTAATTGAAATCG 66940 |||| ||| ||||| ||| ||||| ||| Sbjct 801526 TTGAAACCGAAGTAGTTGTAGTTGAAGTCG 801497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567956391760