Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766475.2_202014-10- 12] 415 sequences; 11,633,571 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq123 136 3e-27 seq337 118 8e-22 seq256 116 3e-21 >seq123 Length=103684 Score = 136 bits (150), Expect = 3e-27 Identities = 393/605 (65%), Gaps = 0/605 (0%) Strand=Plus/Minus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 |||| | ||| ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 49415 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 49356 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || ||||| | ||||| || || | | || | || ||||| || || Sbjct 49355 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 49296 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 |||||||||||||||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 49295 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 49236 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || || ||||| ||||| | ||| || | | |||||||| | || Sbjct 49235 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 49176 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 || || || | ||| || || || || || | || | || |||||||||||| Sbjct 49175 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 49116 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | | || || || || ||| Sbjct 49115 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 49056 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| |||| | | | | || || | ||| ||||| || || |||| | Sbjct 49055 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 48996 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | ||||| ||||| || | ||||||| | || ||||| || | Sbjct 48995 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 48936 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859 |||| || || | | || || || || ||||| || ||| | | | ||| || Sbjct 48935 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 48876 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||| ||| || | ||||| | ||| || || ||||||| || || | |||| Sbjct 48875 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 48816 Query 66920 AAGTA 66924 || || Sbjct 48815 AAATA 48811 >seq337 Length=35501 Score = 118 bits (130), Expect = 8e-22 Identities = 969/1552 (62%), Gaps = 37/1552 (2%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | |||||||| || || ||||| |||||||| || ||||| || || | | Sbjct 28030 GATTAACAACTTGGAATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTG 28089 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| ||| ||||| | | || |||||||||| ||| || || |||||||| || || | Sbjct 28090 GTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCA 28149 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 ||| ||||||| || || | | |||||| | | || ||||| | || Sbjct 28150 TAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCCC 28209 Query 65601 ACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG 65660 |||| | || || | || ||||||||| ||| | | || || | Sbjct 28210 ACAT-GCCAAATGGTTTAG-----CGTTCCACATATCGAATTGTAAAATACCCTTAGAAG 28263 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || ||||| ||| || || || || | | ||| | || |||| || | Sbjct 28264 CTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTT 28323 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTC-GATTA-AGTTCACGTGCCTCATC 65778 | || | ||| ||||| || ||||| || || | ||| |||| | || || || Sbjct 28324 CAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTT--GAGCTTCTTC 28381 Query 65779 GCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACC 65838 || | || | || || || | | |||| ||||||| ||| || || |||| | | Sbjct 28382 CGATTCAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGC 28441 Query 65839 GATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATC 65898 || || | ||| || ||| ||| ||| ||||| || || || |||||||| || Sbjct 28442 AATAGGTCTATGCTTCATATTTGAATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTC 28501 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAAT 65957 ||||| | ||||| ||| | || | || | | || ||| | ||| ||||||| Sbjct 28502 GATAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGT-GTAATCTCTCGAAAT 28560 Query 65958 CAAAATGTTTAGG---ACGATCGGGAGTGCCGGA--CACCACAAACTTGGGAAGGGCAAG 66012 | | | || || ||| | | | | | | || || || ||||||| Sbjct 28561 TATAGCTTGCAGTTTTACCATC-----TTCTGAAACCTCAACGAATGCTGGTAGGGCAAT 28615 Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 ||| || | || || || || | || || || | || ||| ||||| ||||| || Sbjct 28616 AGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACA 28675 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 | |||| | || || || || |||||||| || |||| | || ||||| || Sbjct 28676 TAAATTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTC 28735 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 ||| || | |||| | || || || || || || | | | ||||| | ||| | Sbjct 28736 CTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACAA 28795 Query 66193 AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | || || | || |||| | ||||| | ||||||| | || || | Sbjct 28796 CTTTTGGGCTTTAATTGTTT-TACCACG--ACCTTCTCTTTCGTAACGAGTATATAGTTC 28852 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGCG 66311 ||| || |||||||| || || | || ||| || || || | | || | Sbjct 28853 TTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTG-GGCGAAAACAAAG 28911 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 |||| ||||||| || ||||| ||| || |||||||| ||||| || || || Sbjct 28912 TCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGA 28971 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | | ||| | ||| || || || | || || |||| | | |||| || || | Sbjct 28972 ACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGA 29031 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 |||| || ||||||||||| |||| | | | |||||| | || | ||| |||| Sbjct 29032 AGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCAC 29091 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 | ||||| || || || || ||| ||||| ||||| | ||| || | | |||||| | Sbjct 29092 CCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTG 29151 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 | | || ||||| || |||| || ||| | || || | || | || |||| Sbjct 29152 AAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGAC 29211 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGT 66671 ||| |||||| || || || || || |||||| || || || | || || | Sbjct 29212 CAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTT 29271 Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731 | || |||||| |||| |||| | | | | |||||| | ||| || | || || Sbjct 29272 CGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTAC 29331 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791 | || ||| | || || | |||||| || ||||| ||||| |||| || | Sbjct 29332 CAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAG 29391 Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGG 66850 ||| | |||| || || | ||||| || || || | |||| ||||| | | Sbjct 29392 TCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAA 29450 Query 66851 TATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAG 66906 | ||||| ||||| ||| ||| || | || || ||||| || || ||||| Sbjct 29451 TGCTGAGGACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAG 29506 Query 66907 GGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 ||||||| || || |||| || | |||||| || | | |||||||||| Sbjct 29507 TGTCTTGAATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 29558 >seq256 Length=59626 Score = 116 bits (128), Expect = 3e-21 Identities = 370/569 (65%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| ||| |||| | || || |||| ||||| || |||||||| |||||| Sbjct 22466 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 22407 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185 || | || || | |||||||| || || || |||||||| | | || || Sbjct 22406 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGAA 22347 Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 ||| | | ||||||| || | || || || |||||||| |||||||| || Sbjct 22346 -AACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 22288 Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 ||||| || || | ||| ||| | || || ||| | | ||||| |||| Sbjct 22287 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 22228 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 |||||| ||||| || || || ||| | ||||| || | ||| | | ||||| Sbjct 22227 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 22168 Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||| ||||||| ||| | ||| ||||| |||||||||||||| | || || || Sbjct 22167 TACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 22108 Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476 | |||||| ||| || || ||||| || | |||| ||| | ||| || Sbjct 22107 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 22052 Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 ||||||||| || | | || ||||| | || ||||| |||||| || || Sbjct 22051 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 21993 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 |||||| | || || |||||||| || | || | ||||||||| | ||||| ||| Sbjct 21992 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 21933 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625 || ||||| | | ||||| || |||| Sbjct 21932 GAATTGATCTGTAGAGACGAAGGTTTGCA 21904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565989175600