Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq61 398 2e-108 seq49 109 2e-21 seq78 78.8 3e-12 >seq61 Length=291 Score = 398 bits (440), Expect = 2e-108 Identities = 266/293 (91%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCTCCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 60 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 61 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATG 120 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCA 180 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTT 297 || ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | || Sbjct 181 GCACAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATT 238 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATG 348 | |||||||||||||||||||| | ||||| || |||| | |||| |||||| Sbjct 239 GATTTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATG 291 >seq49 Length=289 Score = 109 bits (120), Expect = 2e-21 Identities = 60/60 (100%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 445 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 61 >seq78 Length=300 Score = 78.8 bits (86), Expect = 3e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACT 56 |||||||||||||||||||||||| || | |||||||||| |||||||||||||| Sbjct 245 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACT 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510379639808