Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000775555.1_202014-11- 12] 354 sequences; 11,386,071 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq204 729 0.0 seq189 93.3 1e-16 >seq204 Length=6361 Score = 729 bits (808), Expect = 0.0 Identities = 469/505 (93%), Gaps = 9/505 (2%) Strand=Plus/Minus Query 43 CCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 6360 CCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 6301 Query 103 CTGACAATGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGT 159 ||||||||||| |||||||||||| |||| |||| ||||||| || || |||| ||| Sbjct 6300 CTGACAATGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGA 6242 Query 160 CGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTT 219 |||| |||| ||||||||||||| |||||||| |||| |||| ||||||||||||| Sbjct 6241 AAATGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTT 6182 Query 220 CACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCG 278 |||| |||||||| |||||||||||||||||||| ||| | ||| ||||||| ||| Sbjct 6181 CACTGGCGCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCA 6126 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 6125 AACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCT 6066 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6065 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 6006 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6005 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 5946 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5945 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 5886 Query 519 CACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||| Sbjct 5885 CACATTGCGTCAACATCACTTTCTG 5861 >seq189 Length=102599 Score = 93.3 bits (102), Expect = 1e-16 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 42 TCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 1 TCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635194211392