Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001029075.1_202015-06- 17] 17 sequences; 12,150,889 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq12 390 2e-106 >seq12 Length=1078087 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 456383 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 456324 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 456323 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 456264 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 456263 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 456206 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 456205 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 456146 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 456145 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 456086 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 456085 GCCCTTTGTA 456076 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 465520 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 465461 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 465460 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 465401 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 465400 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 465343 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 465342 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 465283 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 465282 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 465223 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 465222 GCCCTTTGTA 465213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199838976