Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578265.1_202016-03- 02] 1,513 sequences; 11,329,883 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq975 136 3e-27 seq37 120 2e-22 seq695 114 1e-20 >seq975 Length=7693 Score = 136 bits (150), Expect = 3e-27 Identities = 393/605 (65%), Gaps = 0/605 (0%) Strand=Plus/Minus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 |||| | ||| ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 1948 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 1889 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || ||||| | ||||| || || | | || | || ||||| || || Sbjct 1888 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 1829 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 |||||||||||||||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 1828 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 1769 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || || ||||| ||||| | ||| || | | |||||||| | || Sbjct 1768 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 1709 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 || || || | ||| || || || || || | || | || |||||||||||| Sbjct 1708 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 1649 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | | || || || || ||| Sbjct 1648 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 1589 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| |||| | | | | || || | ||| ||||| || || |||| | Sbjct 1588 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 1529 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | ||||| ||||| || | ||||||| | || ||||| || | Sbjct 1528 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 1469 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859 |||| || || | | || || || || ||||| || ||| | | | ||| || Sbjct 1468 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 1409 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||| ||| || | ||||| | ||| || || ||||||| || || | |||| Sbjct 1408 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 1349 Query 66920 AAGTA 66924 || || Sbjct 1348 AAATA 1344 >seq37 Length=2607 Score = 120 bits (132), Expect = 2e-22 Identities = 371/569 (65%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| ||| |||| | || || |||| ||||| || |||||||| |||||| Sbjct 1026 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 967 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185 || | || || | |||||||| || || || |||||||| | | || || Sbjct 966 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 908 Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 |||| | | ||||||| || | || || || |||||||| |||||||| || Sbjct 907 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 848 Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 ||||| || || | ||| ||| | || || ||| | | ||||| |||| Sbjct 847 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 788 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 |||||| ||||| || || || ||| | ||||| || | ||| | | ||||| Sbjct 787 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 728 Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||| ||||||| ||| | ||| ||||| |||||||||||||| | || || || Sbjct 727 TACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 668 Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476 | |||||| ||| || || ||||| || | |||| ||| | ||| || Sbjct 667 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 612 Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 ||||||||| || | | || ||||| | || ||||| |||||| || || Sbjct 611 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 553 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 |||||| | || || |||||||| || | || | ||||||||| | ||||| ||| Sbjct 552 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 493 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625 || ||||| | | ||||| || |||| Sbjct 492 GAATTGATCTGTAGAGACGAAGGTTTGCA 464 >seq695 Length=13064 Score = 114 bits (126), Expect = 1e-20 Identities = 968/1552 (62%), Gaps = 37/1552 (2%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | |||||||| || || ||||| |||||||| || ||||| || || | | Sbjct 6222 GATTAACAACTTGGAATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTG 6281 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| ||| ||||| | | || |||||||||| ||| || || |||||||| || || | Sbjct 6282 GTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCA 6341 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 ||| ||||||| || || | | |||||| | | || ||||| | || Sbjct 6342 TAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCCC 6401 Query 65601 ACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG 65660 |||| | || || | || ||||||||| ||| | | || || | Sbjct 6402 ACAT-GCCAAATGGTTTAG-----CGTTCCACATATCGAATTGTAAAATACCCTTAGAAG 6455 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || ||||| ||| || || || || | | ||| | || |||| || | Sbjct 6456 CTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTT 6515 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTC-GATTA-AGTTCACGTGCCTCATC 65778 | || | ||| ||||| || ||||| || || | ||| |||| | || || || Sbjct 6516 CAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTT--GAGCTTCTTC 6573 Query 65779 GCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACC 65838 || | || | || || || | | |||| ||||||| ||| || || |||| | | Sbjct 6574 CGATTCAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGC 6633 Query 65839 GATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATC 65898 || || | ||| || ||| ||| ||| ||||| || || || |||||||| || Sbjct 6634 AATAGGTCTATGCTTCATATTTGAATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTC 6693 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAAT 65957 ||||| | ||||| ||| | || | || | | || ||| | ||| ||||||| Sbjct 6694 GATAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGT-GTAATCTCTCGAAAT 6752 Query 65958 CAAAATGTTTAGG---ACGATCGGGAGTGCCGGA--CACCACAAACTTGGGAAGGGCAAG 66012 | | | || || ||| | | | | | | || || || ||||||| Sbjct 6753 TATAGCTTGCAGTTTTACCATC-----TTCTGAAACCTCAACGAATGCTGGTAGGGCAAT 6807 Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 ||| || | || || || || | || || || | || ||| ||||| ||||| || Sbjct 6808 AGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACA 6867 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 | |||| | || || || || |||||||| || |||| | || ||||| || Sbjct 6868 TAAATTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTC 6927 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 ||| || | |||| | || || || || || || | | | ||||| | ||| | Sbjct 6928 CTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACAA 6987 Query 66193 AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | || || | || |||| | ||||| | ||||||| | || || | Sbjct 6988 CTTTTGGGCTTTAATTGTTT-TACCACG--ACCTTCTCTTTCGTAACGAGTATATAGTTC 7044 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGCG 66311 ||| || |||||||| || || | || ||| || || || | | || | Sbjct 7045 TTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTG-GGCGAAAACAAAG 7103 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 |||| ||||||| || ||||| ||| || |||||||| ||||| || || || Sbjct 7104 TCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGA 7163 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | | ||| | ||| || || || | || || |||| | | |||| || || | Sbjct 7164 ACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGA 7223 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 |||| || ||||||||||| |||| | | | |||||| | || | ||| |||| Sbjct 7224 AGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCAC 7283 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 | ||||| || || || || ||| ||||| ||||| | ||| || | | |||||| | Sbjct 7284 CCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTG 7343 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 | | || ||||| || |||| || ||| | || || | || | || |||| Sbjct 7344 AAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGAC 7403 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGT 66671 ||| |||||| || || || || || |||||| || || || | || || | Sbjct 7404 CAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTT 7463 Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731 | || |||||| |||| |||| | | | | |||||| | ||| || | || || Sbjct 7464 CGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTAC 7523 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791 | || ||| | || || | |||||| || ||||| ||||| |||| || | Sbjct 7524 CAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAG 7583 Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGG 66850 ||| | |||| || || | ||||| || || || | |||| ||||| | | Sbjct 7584 TCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAA 7642 Query 66851 TATTGAGGCCGTTCGACC----AGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAG 66906 | ||||| ||||| || ||| || | || || ||||| || || ||||| Sbjct 7643 TGCTGAGGACGTTCTGCCGCTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAG 7698 Query 66907 GGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 ||||||| || || |||| || | |||||| || | | |||||||||| Sbjct 7699 TGTCTTGAATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 7750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560668970320