Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578275.1_202016-03- 02] 1,162 sequences; 11,665,474 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq163 399 9e-109 seq130 239 2e-60 seq80 187 1e-44 seq78 187 1e-44 seq77 187 1e-44 seq76 187 1e-44 seq110 82.4 3e-13 >seq163 Length=510 Score = 399 bits (442), Expect = 9e-109 Identities = 254/272 (93%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 415 TGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGC 474 || |||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||| Sbjct 510 TGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGC 451 Query 475 GTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG-GGTGCACCATCGACCGATCCTGAT 532 |||||||||||||||| |||| || || || || ||||||| |||||||||||||||| Sbjct 450 GTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGTGCACAATCGACCGATCCTGAT 391 Query 533 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 390 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 331 Query 593 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCA 652 |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 330 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCA 271 Query 653 AATCGATCGTCAAATTT-GGGTATAGGGGCGA 683 ||||||||||| ||||| |||||||||||||| Sbjct 270 AATCGATCGTCGAATTTGGGGTATAGGGGCGA 239 >seq130 Length=538 Score = 239 bits (264), Expect = 2e-60 Identities = 161/179 (90%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 331 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 272 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGT-AGAGTGATCGAAAG 141 | | ||||||||||||||||||| |||||||||||||| |||||| | |||||| ||||| Sbjct 271 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTAACAGTGATGGAAAG 212 Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 |||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || Sbjct 211 ATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGC 153 >seq80 Length=626 Score = 187 bits (206), Expect = 1e-44 Identities = 108/111 (97%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 626 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 567 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 566 CGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 516 >seq78 Length=626 Score = 187 bits (206), Expect = 1e-44 Identities = 108/111 (97%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 60 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 61 CGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 111 >seq77 Length=626 Score = 187 bits (206), Expect = 1e-44 Identities = 108/111 (97%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 60 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 61 CGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 111 >seq76 Length=626 Score = 187 bits (206), Expect = 1e-44 Identities = 108/111 (97%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 60 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 61 CGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 111 >seq110 Length=569 Score = 82.4 bits (90), Expect = 3e-13 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 569 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079975075100