Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578275.1_202016-03-
02] 1,162 sequences; 11,665,474 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq177 188 1e-45
>seq177
Length=504
Score = 188 bits (208), Expect = 1e-45
Identities = 204/260 (78%), Gaps = 19/260 (7%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || ||||||||||| |||||||||||| |||||| |
Sbjct 249 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTT-GCGGCTGTCTGATCAGGCATT 305
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 306 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 365
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 366 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 425
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 426 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 484
Query 226 AGCTGGCGGATTGCAATTTC 245
||||||| |||||||| ||
Sbjct 485 TGCTGGCGAATTGCAATGTC 504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819190778368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |