Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578385.1_202016-03-
02] 3,038 sequences; 10,012,846 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2224 188 1e-45
seq2038 107 3e-21
>seq2224
Length=509
Score = 188 bits (208), Expect = 1e-45
Identities = 201/260 (77%), Gaps = 18/260 (7%)
Strand=Plus/Minus
Query 36 TTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAA 95
|||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||
Sbjct 509 TTTTGCGGCTGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAA 450
Query 96 CGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCT----CCTGCACATCGTAG 151
||||||||||||||||||||||| |||||| ||||||| ||| | |||| |||
Sbjct 449 CGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTTCTTTGCTCCACACAATATAG 390
Query 152 TCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GC 201
|||||||||| |||| | || | | ||||| |||||||| ||||||| ||
Sbjct 389 ATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGC 330
Query 202 GTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGA 259
|||||| || ||| ||| ||||||| |||||||| ||| |||| ||||
Sbjct 329 ACTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGA 271
Query 260 T-AAATCCTTTGCAGACGAC 278
| ||||| |||| | |||||
Sbjct 270 TAAAATCATTTGTATACGAC 251
>seq2038
Length=705
Score = 107 bits (118), Expect = 3e-21
Identities = 151/206 (73%), Gaps = 16/206 (8%)
Strand=Plus/Plus
Query 88 TGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCAC 144
||||||||||||||||||||||||||||||| |||||| ||||| |||| | || |||
Sbjct 1 TGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACAC 60
Query 145 ATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCA 195
| ||| |||||||||| |||| | || | | ||||| |||||||| |||
Sbjct 61 AATATAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCA 120
Query 196 ACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGC 252
|||| || |||||| || ||| ||| || ||||||| ||||| ||| ||
Sbjct 121 ACGGTGCTCTTGGCGGAAAGGCCTTGGGTGCT-TGCCGGCGGATAGCAATGTCATTTTGA 179
Query 253 GCAGGGATAAATCCTTTGCAGACGAC 278
| |||||||||| |||| | |||||
Sbjct 180 GTGGGGATAAATCATTTGTATACGAC 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819175890432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |