Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578385.1_202016-03- 02] 3,038 sequences; 10,012,846 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2224 188 1e-45 seq2038 107 3e-21 >seq2224 Length=509 Score = 188 bits (208), Expect = 1e-45 Identities = 201/260 (77%), Gaps = 18/260 (7%) Strand=Plus/Minus Query 36 TTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAA 95 |||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| Sbjct 509 TTTTGCGGCTGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAA 450 Query 96 CGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCT----CCTGCACATCGTAG 151 ||||||||||||||||||||||| |||||| ||||||| ||| | |||| ||| Sbjct 449 CGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTTCTTTGCTCCACACAATATAG 390 Query 152 TCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GC 201 |||||||||| |||| | || | | ||||| |||||||| ||||||| || Sbjct 389 ATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGC 330 Query 202 GTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGA 259 |||||| || ||| ||| ||||||| |||||||| ||| |||| |||| Sbjct 329 ACTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGA 271 Query 260 T-AAATCCTTTGCAGACGAC 278 | ||||| |||| | ||||| Sbjct 270 TAAAATCATTTGTATACGAC 251 >seq2038 Length=705 Score = 107 bits (118), Expect = 3e-21 Identities = 151/206 (73%), Gaps = 16/206 (8%) Strand=Plus/Plus Query 88 TGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCAC 144 ||||||||||||||||||||||||||||||| |||||| ||||| |||| | || ||| Sbjct 1 TGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACAC 60 Query 145 ATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCA 195 | ||| |||||||||| |||| | || | | ||||| |||||||| ||| Sbjct 61 AATATAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCA 120 Query 196 ACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGC 252 |||| || |||||| || ||| ||| || ||||||| ||||| ||| || Sbjct 121 ACGGTGCTCTTGGCGGAAAGGCCTTGGGTGCT-TGCCGGCGGATAGCAATGTCATTTTGA 179 Query 253 GCAGGGATAAATCCTTTGCAGACGAC 278 | |||||||||| |||| | ||||| Sbjct 180 GTGGGGATAAATCATTTGTATACGAC 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819175890432