Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001584535.1_202015-12- 07] 125 sequences; 11,620,879 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq83 288 1e-75 seq79 288 1e-75 >seq83 Length=8222 Score = 288 bits (318), Expect = 1e-75 Identities = 204/229 (89%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 4897 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 4840 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 4839 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 4780 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| |||||||| || | | ||||||||||||||||||| Sbjct 4779 ACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 4722 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 4721 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 4673 >seq79 Length=319294 Score = 288 bits (318), Expect = 1e-75 Identities = 204/229 (89%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 313483 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 313426 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 313425 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 313366 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| |||||||| || | | ||||||||||||||||||| Sbjct 313365 ACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 313308 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 313307 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 313259 Score = 288 bits (318), Expect = 1e-75 Identities = 204/229 (89%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 315214 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 315157 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 315156 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 315097 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| |||||||| || | | ||||||||||||||||||| Sbjct 315096 ACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 315039 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 315038 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 314990 Score = 98.7 bits (108), Expect = 1e-18 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 315593 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 315536 Query 61 CTCGTTGAAGA 71 ||||||||||| Sbjct 315535 CTCGTTGAAGA 315525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999089375