Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001584535.1_202015-12- 07] 125 sequences; 11,620,879 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq83 668 0.0 seq79 504 3e-140 >seq83 Length=8222 Score = 668 bits (740), Expect = 0.0 Identities = 556/670 (83%), Gaps = 15/670 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 6072 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 6131 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 6132 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 6191 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 6192 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 6251 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 6252 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 6308 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 6309 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 6367 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 6368 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 6425 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 6426 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 6485 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| Sbjct 6486 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 6545 Query 496 GGGAACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 || || || || ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 6546 TGGGGCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 6605 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6606 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 6665 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct 6666 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 6725 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 6726 ATAGGGGCGA 6735 >seq79 Length=319294 Score = 504 bits (558), Expect = 3e-140 Identities = 510/669 (76%), Gaps = 66/669 (10%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 317107 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 317166 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 317167 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 317226 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 317227 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 317286 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 317287 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 317343 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 317344 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 317402 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 317403 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 317460 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 317461 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 317520 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||| | ||| Sbjct 317521 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGC--------------------- 317559 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 |||||||||| ||||||||||| ||||||| Sbjct 317560 ------------------------------TCCTGATGTCGTCGGATGGATT-GAGTAAG 317588 Query 556 AGCATAGCTG-TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 317589 AGCATAGCTGGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 317648 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct 317649 GAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTA 317708 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 317709 TAGGGGCGA 317717 Score = 113 bits (124), Expect = 2e-22 Identities = 74/82 (90%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 316932 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 316991 Query 83 TTCTTCTAAAGCTAAATATTGG 104 | | |||||||||||||||||| Sbjct 316992 TCCATCTAAAGCTAAATATTGG 317013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997318750