Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001634645.1_202016-05-
11] 32 sequences; 12,377,172 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq29 257 2e-66
seq23 257 2e-66
seq22 257 2e-66
seq21 257 2e-66
seq18 257 2e-66
seq12 257 2e-66
>seq29
Length=15344
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 12361 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 12420
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 12421 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 12479
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 12480 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 12539
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 12540 TTGGATTTATT 12550
>seq23
Length=8703
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 971 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 912
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 911 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 853
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 852 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 793
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 792 TTGGATTTATT 782
>seq22
Length=19501
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 3097 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 3038
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 3037 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 2979
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 2978 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 2919
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 2918 TTGGATTTATT 2908
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 12234 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 12175
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 12174 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 12116
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 12115 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 12056
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 12055 TTGGATTTATT 12045
>seq21
Length=20250
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 1333 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 1392
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1393 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 1451
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 1452 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 1511
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 1512 TTGGATTTATT 1522
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 10478 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 10537
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 10538 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 10596
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 10597 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 10656
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 10657 TTGGATTTATT 10667
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 19604 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 19663
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 19664 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 19722
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 19723 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 19782
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 19783 TTGGATTTATT 19793
>seq18
Length=11547
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 538 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 479
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 478 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 420
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 419 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 360
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 359 TTGGATTTATT 349
>seq12
Length=1070766
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 454324 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 454265
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 454264 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 454206
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 454205 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 454146
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 454145 TTGGATTTATT 454135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511999841280
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