Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669875.1_202016-06- 20] 17 sequences; 12,117,492 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 338 3e-90 >seq12 Length=1076857 Score = 338 bits (374), Expect = 3e-90 Identities = 413/571 (72%), Gaps = 15/571 (3%) Strand=Plus/Minus Query 50 GTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGA 109 ||| ||||| | || ||| || || ||||| ||||||||||||||| ||| ||| Sbjct 453983 GTTNGGGAANGNAGNNCTANNTGNNNGGNAAATTCNATCTAAAGCTAAATATNGGCGAGA 453924 Query 110 GACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAA 169 |||||| |||| |||||| |||||| ||||||||||||| |||||| |||||||| || Sbjct 453923 GACCGANAGCGANCAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAA 453864 Query 170 AAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCA 229 |||| ||||||||||||||||||||||| || | | ||||| || ||| | Sbjct 453863 AAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT 453804 Query 230 ACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCG 284 | || ||| | | | | | ||| | ||| |||||||||||| | || | Sbjct 453803 --CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTG 453747 Query 285 GTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAA 344 | ||||||| || ||||||| || | |||| || |||||||| | || ||| Sbjct 453746 GCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAA 453690 Query 345 TGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTA 402 | | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| || Sbjct 453689 TACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATA 453630 Query 403 AGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC 462 || |||||||||| |||||||||||||||||||||| |||||||||||||||||| || Sbjct 453629 TGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGNGTA 453570 Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| ||| |||| | || || || || | |||| Sbjct 453569 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCNCAATCG 453510 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 |||||||| ||| || || ||| || | | | || | || |||| || | Sbjct 453509 ACCGATCCNNATGNCTNNGGNTGGNNTTNNNNNANANCNNNGCNNTNGGNACCCNAANNA 453450 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 || || || |||||||| || ||| ||| Sbjct 453449 NGGNGANCTNNGCCTGAATNGGNNGAANCCA 453419 Score = 338 bits (374), Expect = 3e-90 Identities = 397/540 (74%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||| |||| |||||||| |||||||||||||| |||||| |||||| |||||||||| Sbjct 463083 TCTANAGCTNNATATTGGCGAGAGACCGATAGCGANCAAGTACAGTGATGGAAAGATGAA 463024 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463023 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 462964 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 462963 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 462907 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 462906 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 462848 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 462847 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 462790 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 462789 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 462730 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 |||||||||||||||||| || |||||| | ||||||||||||||||||| ||| |||| Sbjct 462729 GTCTATGCGAGTGTTTGGGNGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 462670 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || |||| ||| || |||||||||||| || ||| |||| |||| Sbjct 462669 GCCTCGCAAGAGGNGCACAATCNNNCGNTCCTGATGTCTTNGGNTGGNNNTGAGNAAGAN 462610 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 || |||||||||| || || | |||||| ||| |||| | | |||| || Sbjct 462609 CANNGCTGTTGGGANCCNNNNGANGNNGAACTANNCCTNNNNAGGGNGNNNCNAGAGNAA 462550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350