Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669875.1_202016-06-
20] 17 sequences; 12,117,492 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 338 3e-90
>seq12
Length=1076857
Score = 338 bits (374), Expect = 3e-90
Identities = 413/571 (72%), Gaps = 15/571 (3%)
Strand=Plus/Minus
Query 50 GTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGA 109
||| ||||| | || ||| || || ||||| ||||||||||||||| ||| |||
Sbjct 453983 GTTNGGGAANGNAGNNCTANNTGNNNGGNAAATTCNATCTAAAGCTAAATATNGGCGAGA 453924
Query 110 GACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAA 169
|||||| |||| |||||| |||||| ||||||||||||| |||||| |||||||| ||
Sbjct 453923 GACCGANAGCGANCAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAA 453864
Query 170 AAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCA 229
|||| ||||||||||||||||||||||| || | | ||||| || ||| |
Sbjct 453863 AAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT 453804
Query 230 ACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCG 284
| || ||| | | | | | ||| | ||| |||||||||||| | || |
Sbjct 453803 --CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTG 453747
Query 285 GTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAA 344
| ||||||| || ||||||| || | |||| || |||||||| | || |||
Sbjct 453746 GCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAA 453690
Query 345 TGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTA 402
| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| ||
Sbjct 453689 TACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATA 453630
Query 403 AGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC 462
|| |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 453629 TGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGNGTA 453570
Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCG 520
|||||| | ||||||||||||||||||| ||| |||| | || || || || | ||||
Sbjct 453569 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCNCAATCG 453510
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||||||| ||| || || ||| || | | | || | || |||| || |
Sbjct 453509 ACCGATCCNNATGNCTNNGGNTGGNNTTNNNNNANANCNNNGCNNTNGGNACCCNAANNA 453450
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCA 611
|| || || |||||||| || ||| |||
Sbjct 453449 NGGNGANCTNNGCCTGAATNGGNNGAANCCA 453419
Score = 338 bits (374), Expect = 3e-90
Identities = 397/540 (74%), Gaps = 15/540 (3%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||| |||| |||||||| |||||||||||||| |||||| |||||| ||||||||||
Sbjct 463083 TCTANAGCTNNATATTGGCGAGAGACCGATAGCGANCAAGTACAGTGATGGAAAGATGAA 463024
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 463023 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 462964
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 462963 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 462907
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 462906 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 462848
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 462847 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 462790
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 462789 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 462730
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498
|||||||||||||||||| || |||||| | ||||||||||||||||||| ||| ||||
Sbjct 462729 GTCTATGCGAGTGTTTGGGNGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 462670
Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| || || || |||| ||| || |||||||||||| || ||| |||| ||||
Sbjct 462669 GCCTCGCAAGAGGNGCACAATCNNNCGNTCCTGATGTCTTNGGNTGGNNNTGAGNAAGAN 462610
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
|| |||||||||| || || | |||||| ||| |||| | | |||| ||
Sbjct 462609 CANNGCTGTTGGGANCCNNNNGANGNNGAACTANNCCTNNNNAGGGNGNNNCNAGAGNAA 462550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |