Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669905.1_202016-06- 20] 17 sequences; 12,131,132 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12 251 1e-64 >seq12 Length=1077312 Score = 251 bits (278), Expect = 1e-64 Identities = 201/244 (82%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 455851 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 455910 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 455911 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 455970 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 455971 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 456027 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| |||||||||| | || |||| |||| || |||||| | || |||| || || Sbjct 456028 TAAGCAGACAAATCNCNCCNCCAANTAAGNNCGNCCATGCNNCNCCNCCCANNAAANNAA 456087 Query 239 GAAA 242 |||| Sbjct 456088 GAAA 456091 Score = 230 bits (254), Expect = 4e-58 Identities = 177/209 (85%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 464988 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 465047 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 465048 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 465107 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 465108 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 465164 Query 179 TAACCAGACAAATCACTCCACCAACTAAG 207 ||| |||||||||| | | | ||||||| Sbjct 465165 TAAGCAGACAAATCNCNCNNCNAACTAAG 465193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799868777