Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669935.1_202016-06- 20] 17 sequences; 12,122,583 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12 774 0.0 >seq12 Length=1077543 Score = 774 bits (858), Expect = 0.0 Identities = 500/541 (92%), Gaps = 9/541 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 452193 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 452252 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 452253 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 452312 Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| |||| ||||||| || || |||| ||| |||| |||| |||||||||| Sbjct 452313 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 452371 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 ||| |||||||| |||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct 452372 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 452428 Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||| ||||| | ||| ||||||| ||| ||||||||||||||||||||||| Sbjct 452429 TTATTCTACNCCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 452487 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 452488 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 452547 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452548 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 452607 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 452608 CATTTGGCTACCTTAAGAGAGTCATAGTTNCTCCCGCCGTTTACCCGCGCTTGGTTGAAT 452667 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452668 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 452727 Query 543 G 543 | Sbjct 452728 G 452728 Score = 774 bits (858), Expect = 0.0 Identities = 500/541 (92%), Gaps = 9/541 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 461330 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 461389 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 461390 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 461449 Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| |||| ||||||| || || |||| ||| |||| |||| |||||||||| Sbjct 461450 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 461508 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 ||| |||||||| |||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct 461509 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 461565 Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||| ||||| | ||| ||||||| ||| ||||||||||||||||||||||| Sbjct 461566 TTATTCTACNCCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 461624 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 461625 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 461684 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461685 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 461744 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 461745 CATTTGGCTACCTTAAGAGAGTCATAGTTNCTCCCGCCGTTTACCCGCGCTTGGTTGAAT 461804 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461805 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 461864 Query 543 G 543 | Sbjct 461865 G 461865 Score = 143 bits (158), Expect = 9e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 490161 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 490220 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||||||||||||||||||||||| || Sbjct 490221 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 490254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199722016