Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001669965.1_202016-06- 20] 17 sequences; 12,111,851 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 437 4e-120 >seq12 Length=1076792 Score = 437 bits (484), Expect = 4e-120 Identities = 431/553 (78%), Gaps = 15/553 (3%) Strand=Plus/Minus Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||| | || ||||| || |||||||||||||| ||||||| |||||| ||||||||||| Sbjct 463396 CTANANCTNAATATNNGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAA 463337 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 || |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463336 AGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 463277 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463276 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 463220 Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463219 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 463161 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | | Sbjct 463160 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 463103 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463102 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 463043 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| || Sbjct 463042 TCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGG 462983 Query 501 CC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 || || || || |||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct 462982 CCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTNCGGATGGNTTTGAGTAAGAGC 462923 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||| ||| |||||||||||||||| ||||||||||||||||| | || |||||||| | Sbjct 462922 ATAGNTGTNGGGACCCGAAAGATGGNGAACTATGCCTGAATAGNGNGANGCCAGAGGNAN 462863 Query 619 CTCTGGTGGAGGC 631 |||||| || ||| Sbjct 462862 CTCTGGNGGNGGC 462850 Score = 419 bits (464), Expect = 1e-114 Identities = 425/551 (77%), Gaps = 15/551 (3%) Strand=Plus/Minus Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 || ||| || || |||||||||| | ||||||| |||| | ||||||||||||| | Sbjct 454255 AGNTAANTANTGNNGNNAGACCGATAGNGAACAAGTACAGTGNTGGAAAGATGAAAAGAA 454196 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 ||||| |||||||| |||||| ||||||||||||||||||||||| || | | |||| Sbjct 454195 CTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 454136 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266 | || ||| | | || ||| | | | | | ||| | ||| || Sbjct 454135 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 454079 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 454078 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 454020 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384 |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||| Sbjct 454019 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 453962 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||| Sbjct 453961 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 453902 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-C 503 ||||||||||||||||| |||||| | ||||||||||||| ||||| |||| || || | Sbjct 453901 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCCTC 453842 Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | || || |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453841 GCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 453782 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||| | | Sbjct 453781 CTGTTGGGACCCGAAAGATGGNGAACTATGCCTNAATAGGGNNAAGCCAGNNGAAANTNT 453722 Query 623 GGTGGAGGCTC 633 || | | |||| Sbjct 453721 GGNGNANGCTC 453711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350