Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670055.1_202016-06- 20] 17 sequences; 12,122,754 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 394 4e-107 >seq12 Length=1077312 Score = 394 bits (436), Expect = 4e-107 Identities = 411/537 (77%), Gaps = 15/537 (3%) Strand=Plus/Minus Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 ||||||||| ||||||| | |||||||||||| ||||||| || ||| |||||||||||| Sbjct 454853 TAAAGCTAANTATTGGCGANAGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAAAA 454794 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 | |||||| ||||||||| |||||| ||||||||||||||||||||||| || | | | Sbjct 454793 GAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454734 Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264 |||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454733 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454677 Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454676 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454618 Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | || Sbjct 454617 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454560 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| | Sbjct 454559 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454500 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500 ||||||||||||||||| || |||||| | ||||||||||||||||||| ||| |||| Sbjct 454499 CTATGCGAGTGTTTGGGNGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 454440 Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || || || |||| |||| ||||||||||| |||| ||||||||| | |||||| Sbjct 454439 CTCGCAAGAGGNGCACAATCGNCCGATCCTGATNNCTTCNNATGGATTTGNGNAAGAGCN 454380 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 | ||||| | |||| ||||||||| | |||||||| |||| ||| ||||||| |||| Sbjct 454379 TNGCTGTNGNGACCNGAAAGATGGNGNACTATGCCNGAATNGGGNGAAGCCANAGGA 454323 Score = 352 bits (390), Expect = 1e-94 Identities = 386/510 (76%), Gaps = 15/510 (3%) Strand=Plus/Minus Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || |||| ||||||| | ||||||| | ||| ||||||||||||| |||| Sbjct 463984 TAAATATNGGNGAGAGNCCGATAGNGAACAAGTACNGNGATGGAAAGATGAAAAGAACTT 463925 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 || |||||||| |||||| ||||||||||||||||||||||| || | | ||||| | Sbjct 463924 TGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACAT 463865 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCA 269 | ||| | | || ||| | | | | | ||| | ||| ||||| Sbjct 463864 GGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCA 463808 Query 270 GCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTA 329 ||||||| | || || ||||||| || ||||||| || | |||| || ||| Sbjct 463807 GCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTA 463749 Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCT 387 ||||| | || |||| | ||| || ||||||||| | ||| | | | |||||||| Sbjct 463748 TAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCT 463691 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 ||| |||||||| || || |||||||||| |||||||||||||||||||||| ||||||| Sbjct 463690 GGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGC 463631 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTG 506 |||||||||||||| |||||| | ||||||||||||||||||| || |||| | || Sbjct 463630 GAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTNGGTTGGGGCCTCGCA 463571 Query 507 AG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 || || |||| ||||||||||||||||||||| |||||| |||| ||||||||| ||||| Sbjct 463570 AGAGGNGCACAATCGACCGATCCTGATGTCTTNGGATGGNTTTGNGTAAGAGCANAGCTG 463511 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCT 595 | ||||| ||| | ||| ||| ||| ||| Sbjct 463510 TNGGGACNCGANANNTGGNGAANTATNCCT 463481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350