Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670055.1_202016-06-
20] 17 sequences; 12,122,754 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 394 4e-107
>seq12
Length=1077312
Score = 394 bits (436), Expect = 4e-107
Identities = 411/537 (77%), Gaps = 15/537 (3%)
Strand=Plus/Minus
Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148
||||||||| ||||||| | |||||||||||| ||||||| || ||| ||||||||||||
Sbjct 454853 TAAAGCTAANTATTGGCGANAGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAAAA 454794
Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208
| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | | |
Sbjct 454793 GAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454734
Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264
|||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 454733 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454677
Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 454676 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454618
Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||
Sbjct 454617 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454560
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| |
Sbjct 454559 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454500
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500
||||||||||||||||| || |||||| | ||||||||||||||||||| ||| ||||
Sbjct 454499 CTATGCGAGTGTTTGGGNGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 454440
Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || || || |||| |||| ||||||||||| |||| ||||||||| | ||||||
Sbjct 454439 CTCGCAAGAGGNGCACAATCGNCCGATCCTGATNNCTTCNNATGGATTTGNGNAAGAGCN 454380
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616
| ||||| | |||| ||||||||| | |||||||| |||| ||| ||||||| ||||
Sbjct 454379 TNGCTGTNGNGACCNGAAAGATGGNGNACTATGCCNGAATNGGGNGAAGCCANAGGA 454323
Score = 352 bits (390), Expect = 1e-94
Identities = 386/510 (76%), Gaps = 15/510 (3%)
Strand=Plus/Minus
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| || |||| ||||||| | ||||||| | ||| ||||||||||||| ||||
Sbjct 463984 TAAATATNGGNGAGAGNCCGATAGNGAACAAGTACNGNGATGGAAAGATGAAAAGAACTT 463925
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214
|| |||||||| |||||| ||||||||||||||||||||||| || | | ||||| |
Sbjct 463924 TGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACAT 463865
Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCA 269
| ||| | | || ||| | | | | | ||| | ||| |||||
Sbjct 463864 GGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCA 463808
Query 270 GCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTA 329
||||||| | || || ||||||| || ||||||| || | |||| || |||
Sbjct 463807 GCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTA 463749
Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCT 387
||||| | || |||| | ||| || ||||||||| | ||| | | | ||||||||
Sbjct 463748 TAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCT 463691
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447
||| |||||||| || || |||||||||| |||||||||||||||||||||| |||||||
Sbjct 463690 GGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGC 463631
Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTG 506
|||||||||||||| |||||| | ||||||||||||||||||| || |||| | ||
Sbjct 463630 GAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTNGGTTGGGGCCTCGCA 463571
Query 507 AG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|| || |||| ||||||||||||||||||||| |||||| |||| ||||||||| |||||
Sbjct 463570 AGAGGNGCACAATCGACCGATCCTGATGTCTTNGGATGGNTTTGNGTAAGAGCANAGCTG 463511
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCT 595
| ||||| ||| | ||| ||| ||| |||
Sbjct 463510 TNGGGACNCGANANNTGGNGAANTATNCCT 463481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |