Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670085.1_202016-06- 20] 17 sequences; 12,135,904 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 365 2e-98 >seq12 Length=1077601 Score = 365 bits (404), Expect = 2e-98 Identities = 417/565 (74%), Gaps = 15/565 (3%) Strand=Plus/Minus Query 64 CTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCAC 123 |||||| ||| | | || | |||| |||| ||||||| | |||||||||||| | || Sbjct 454663 CTCTAAGNGGGNNGNANNTTNCATCTANAGCTNAATATTGNCNAGAGACCGATAGNGAAC 454604 Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 183 ||||| |||||| ||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct 454603 AAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAAT 454544 Query 184 TGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGC 243 |||||||||||||| || | | ||||| || ||| | | || ||| | Sbjct 454543 TGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTG 454486 Query 244 CG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCC 298 | | | | ||| | ||| |||||||||||| | || || ||||||| || Sbjct 454485 GGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CC 454428 Query 299 CCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358 ||||||| || | |||| || |||||||| | || |||| | ||| || || Sbjct 454427 ATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGG 454370 Query 359 ACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTG 416 ||||||| | ||| | | | ||||||||||| |||||||| || || |||||||||| Sbjct 454369 ACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTG 454310 Query 417 GAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGT 476 |||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||| Sbjct 454309 AAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGT 454250 Query 477 AATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGT 534 |||||||||||||| ||| |||| | || || || |||| |||| |||||||||||| Sbjct 454249 AATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATCGNCCGATCCTGATGN 454190 Query 535 CTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCC 594 |||||| |||||||||| || ||| | || || || |||| || |||| || | Sbjct 454189 CTTCGGNTGGATTTGAGNAANAGCNNANCTNNNGGNNNNCGNAAGANGGNNAACTNTGNC 454130 Query 595 TGAATAGGGTGAAGCCAGAGGAAAC 619 ||| ||| ||| | |||||| Sbjct 454129 NGAANNGGGNGAANNNANNGGAAAC 454105 Score = 354 bits (392), Expect = 3e-95 Identities = 396/529 (75%), Gaps = 15/529 (3%) Strand=Plus/Minus Query 91 AAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 ||| || || || ||||||||||||| ||||| | |||||| ||||||||||||| Sbjct 463773 AAGNNAANNATNGGNGAGAGACCGATAGCNAACAAGNACAGTGATGGAAAGATGAAAAGA 463714 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 |||||| |||||||| |||||| ||||||||||||||||||||||| || | | ||| Sbjct 463713 ACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAG 463654 Query 211 ACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---G 265 || || ||| | | || ||| | | | | | ||| | ||| | Sbjct 463653 ACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGG 463597 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 ||||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 463596 GCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGT 463538 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGA 383 |||||||| | || |||| | ||| || ||||||||| | ||| | | | |||| Sbjct 463537 ATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGA 463480 Query 384 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443 ||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||| Sbjct 463479 TGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCT 463420 Query 444 ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACC 502 |||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | Sbjct 463419 ATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCT 463360 Query 503 CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 || || || |||| |||||||||||| | ||| ||||| |||||||||| |||||||| Sbjct 463359 CGCAAGAGGNGCACAATCGACCGATCCNGNNGTCNTCGGANGGATTTGAGTNAGAGCATA 463300 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 |||||| || || || | || | ||||| |||||| | || ||| || Sbjct 463299 GCTGTTNGGNCCNGANANATNGNGAACTNTGCCTGNANNGGNNGAANCC 463251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350