Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670085.1_202016-06-
20] 17 sequences; 12,135,904 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 365 2e-98
>seq12
Length=1077601
Score = 365 bits (404), Expect = 2e-98
Identities = 417/565 (74%), Gaps = 15/565 (3%)
Strand=Plus/Minus
Query 64 CTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCAC 123
|||||| ||| | | || | |||| |||| ||||||| | |||||||||||| | ||
Sbjct 454663 CTCTAAGNGGGNNGNANNTTNCATCTANAGCTNAATATTGNCNAGAGACCGATAGNGAAC 454604
Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 183
||||| |||||| ||||||||||||| |||||| |||||||| |||||| |||||||||
Sbjct 454603 AAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAAT 454544
Query 184 TGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGC 243
|||||||||||||| || | | ||||| || ||| | | || ||| |
Sbjct 454543 TGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTG 454486
Query 244 CG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCC 298
| | | | ||| | ||| |||||||||||| | || || ||||||| ||
Sbjct 454485 GGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CC 454428
Query 299 CCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358
||||||| || | |||| || |||||||| | || |||| | ||| || ||
Sbjct 454427 ATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGG 454370
Query 359 ACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTG 416
||||||| | ||| | | | ||||||||||| |||||||| || || ||||||||||
Sbjct 454369 ACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTG 454310
Query 417 GAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGT 476
|||||||||||||||||||||| ||||||||||||||||||||| |||||| | |||||
Sbjct 454309 AAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGT 454250
Query 477 AATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGT 534
|||||||||||||| ||| |||| | || || || |||| |||| ||||||||||||
Sbjct 454249 AATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATCGNCCGATCCTGATGN 454190
Query 535 CTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCC 594
|||||| |||||||||| || ||| | || || || |||| || |||| || |
Sbjct 454189 CTTCGGNTGGATTTGAGNAANAGCNNANCTNNNGGNNNNCGNAAGANGGNNAACTNTGNC 454130
Query 595 TGAATAGGGTGAAGCCAGAGGAAAC 619
||| ||| ||| | ||||||
Sbjct 454129 NGAANNGGGNGAANNNANNGGAAAC 454105
Score = 354 bits (392), Expect = 3e-95
Identities = 396/529 (75%), Gaps = 15/529 (3%)
Strand=Plus/Minus
Query 91 AAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150
||| || || || ||||||||||||| ||||| | |||||| |||||||||||||
Sbjct 463773 AAGNNAANNATNGGNGAGAGACCGATAGCNAACAAGNACAGTGATGGAAAGATGAAAAGA 463714
Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210
|||||| |||||||| |||||| ||||||||||||||||||||||| || | | |||
Sbjct 463713 ACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAG 463654
Query 211 ACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---G 265
|| || ||| | | || ||| | | | | | ||| | ||| |
Sbjct 463653 ACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGG 463597
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
||||||||||| | || || ||||||| || ||||||| || | |||| ||
Sbjct 463596 GCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGT 463538
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGA 383
|||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||
Sbjct 463537 ATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGA 463480
Query 384 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443
||||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||
Sbjct 463479 TGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCT 463420
Query 444 ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACC 502
|||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| |
Sbjct 463419 ATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCT 463360
Query 503 CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
|| || || |||| |||||||||||| | ||| ||||| |||||||||| ||||||||
Sbjct 463359 CGCAAGAGGNGCACAATCGACCGATCCNGNNGTCNTCGGANGGATTTGAGTNAGAGCATA 463300
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610
|||||| || || || | || | ||||| |||||| | || ||| ||
Sbjct 463299 GCTGTTNGGNCCNGANANATNGNGAACTNTGCCTGNANNGGNNGAANCC 463251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |