Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670085.1_202016-06-
20] 17 sequences; 12,135,904 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq12 219 7e-55
>seq12
Length=1077601
Score = 219 bits (242), Expect = 7e-55
Identities = 229/293 (78%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 451932 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 451875
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 451874 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 451815
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 451814 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 451755
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 451754 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGNGCT- 451696
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| ||||||| ||| |||| |||||||||| |||| | |||||
Sbjct 451695 TGCTGGCGNNTTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGAC 451643
Score = 210 bits (232), Expect = 4e-52
Identities = 227/293 (77%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 461069 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 461012
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 461011 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 460952
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 460951 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 460892
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 460891 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 460833
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| || ||| | || |||| |||||||||| |||| | |||||
Sbjct 460832 TGCTGGCGAATNGCANTGNCATTTTGCGTGGGGATAAATCATTTGTATACGAC 460780
Score = 95.1 bits (104), Expect = 2e-17
Identities = 71/81 (88%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 489900 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 489843
Query 61 GCCGCGAAGCTACCATCTGCT 81
||||||||||||||||| |||
Sbjct 489842 GCCGCGAAGCTACCATCCGCT 489822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199865088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |