Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670115.1_202016-06-
20] 17 sequences; 12,125,338 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 289 1e-75
>seq12
Length=1077449
Score = 289 bits (320), Expect = 1e-75
Identities = 367/506 (73%), Gaps = 15/506 (3%)
Strand=Plus/Minus
Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95
||| | | ||||| | | || ||| || ||| || | | | |||||||||
Sbjct 454604 CGANGNGNCGAGTNNTNNGNGANTGCNNCTNTAAGNGGNNNNNNANNTCCATCTAAAGCT 454545
Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155
||||| |||| || ||||||||||| ||||| | |||||| ||||||||||||| |||||
Sbjct 454544 AAATANTGGCGAGNGACCGATAGCGAACAAGNACAGTGATGGAAAGATGAAAAGAACTTT 454485
Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
| |||||||| |||||| ||||||||||||||||||||||| || | | ||||| ||
Sbjct 454484 GAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATG 454425
Query 216 CCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAG 270
||| | | || ||| | | | | | ||| | ||| ||||||
Sbjct 454424 GTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAG 454368
Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330
|||||| | || || ||||||| || ||||||| || | |||| || ||||
Sbjct 454367 CATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTAT 454309
Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTG 388
|||| | || |||| | ||| || ||||||||| | ||| | | | |||||||||
Sbjct 454308 AGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTG 454251
Query 389 GCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCG 448
|| |||||||| || || |||||||||| |||||||||||||||||||||| ||||||||
Sbjct 454250 GCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCG 454191
Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGA 507
||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| | || |
Sbjct 454190 AGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCCTCGCAA 454131
Query 508 G-GGTGCACCATCGACCGATCCTGAT 532
| || || | |||| | | ||| ||
Sbjct 454130 GAGGNGCNCAATCGNCNNANCCTNAT 454105
Score = 282 bits (312), Expect = 2e-73
Identities = 342/462 (74%), Gaps = 15/462 (3%)
Strand=Plus/Minus
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|| ||||||||||| || || ||||||||||| |||||| |||||| |||||||||||
Sbjct 463689 CTNAAGCTAAATATNNGCGAGNGACCGATAGCGANCAAGTACAGTGATGGAAAGATGAAA 463630
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
|| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 463629 AGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 463570
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 463569 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 463513
Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 463512 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 463454
Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | | |
Sbjct 463453 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 463396
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 463395 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 463336
Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499
||||||||||||||||||||| |||||| | ||||||||||||| ||||| ||| ||||
Sbjct 463335 TCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGNAGGTTGGGG 463276
Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGG 540
| || || || ||| | || | | |||| || | ||||
Sbjct 463275 CCTCGCNAGAGGNGCANAANCGNCNGNTCCTNATNTNNTCGG 463234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |