Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670115.1_202016-06- 20] 17 sequences; 12,125,338 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 289 1e-75 >seq12 Length=1077449 Score = 289 bits (320), Expect = 1e-75 Identities = 367/506 (73%), Gaps = 15/506 (3%) Strand=Plus/Minus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 ||| | | ||||| | | || ||| || ||| || | | | ||||||||| Sbjct 454604 CGANGNGNCGAGTNNTNNGNGANTGCNNCTNTAAGNGGNNNNNNANNTCCATCTAAAGCT 454545 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||||| |||| || ||||||||||| ||||| | |||||| ||||||||||||| ||||| Sbjct 454544 AAATANTGGCGAGNGACCGATAGCGAACAAGNACAGTGATGGAAAGATGAAAAGAACTTT 454485 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 | |||||||| |||||| ||||||||||||||||||||||| || | | ||||| || Sbjct 454484 GAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATG 454425 Query 216 CCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAG 270 ||| | | || ||| | | | | | ||| | ||| |||||| Sbjct 454424 GTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAG 454368 Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 |||||| | || || ||||||| || ||||||| || | |||| || |||| Sbjct 454367 CATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTAT 454309 Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTG 388 |||| | || |||| | ||| || ||||||||| | ||| | | | ||||||||| Sbjct 454308 AGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTG 454251 Query 389 GCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCG 448 || |||||||| || || |||||||||| |||||||||||||||||||||| |||||||| Sbjct 454250 GCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCG 454191 Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGA 507 ||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| | || | Sbjct 454190 AGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCCTCGCAA 454131 Query 508 G-GGTGCACCATCGACCGATCCTGAT 532 | || || | |||| | | ||| || Sbjct 454130 GAGGNGCNCAATCGNCNNANCCTNAT 454105 Score = 282 bits (312), Expect = 2e-73 Identities = 342/462 (74%), Gaps = 15/462 (3%) Strand=Plus/Minus Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 || ||||||||||| || || ||||||||||| |||||| |||||| ||||||||||| Sbjct 463689 CTNAAGCTAAATATNNGCGAGNGACCGATAGCGANCAAGTACAGTGATGGAAAGATGAAA 463630 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 || |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463629 AGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 463570 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463569 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 463513 Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463512 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 463454 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | | Sbjct 463453 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 463396 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463395 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 463336 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499 ||||||||||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| Sbjct 463335 TCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGNAGGTTGGGG 463276 Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGG 540 | || || || ||| | || | | |||| || | |||| Sbjct 463275 CCTCGCNAGAGGNGCANAANCGNCNGNTCCTNATNTNNTCGG 463234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350