Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670145.1_202016-06- 20] 17 sequences; 12,136,761 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 304 5e-80 >seq12 Length=1077600 Score = 304 bits (336), Expect = 5e-80 Identities = 365/495 (74%), Gaps = 15/495 (3%) Strand=Plus/Minus Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| || ||| ||||| || | | || | | ||||||||||||| |||| Sbjct 463795 TAAATATTGGCGNGANACCNNTAGCGAACNANNACAGNGNTGGAAAGATGAAAAGAACTT 463736 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 || |||||||| |||||| ||||||||||||||||||||||| || | | ||||| | Sbjct 463735 TGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACAT 463676 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCA 269 | ||| | | || ||| | | | | | ||| | ||| ||||| Sbjct 463675 GGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCA 463619 Query 270 GCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTA 329 ||||||| | || || ||||||| || ||||||| || | |||| || ||| Sbjct 463618 GCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTA 463560 Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCT 387 ||||| | || |||| | ||| || ||||||||| | ||| | | | |||||||| Sbjct 463559 TAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCT 463502 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 ||| |||||||| || || |||||||||| |||||||||||||||||||||| ||||||| Sbjct 463501 GGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGC 463442 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTG 506 |||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | || Sbjct 463441 GAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCA 463382 Query 507 AG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 || || |||| |||| ||||||| |||||||| ||||||||| | ||||| | | | Sbjct 463381 AGAGGNGCACAATCGNCCGATCCNGATGTCTTNGGATGGATTNGNGTAAGNGNNNANNTN 463322 Query 566 TTGGGACCCGAAAGA 580 |||| | || |||| Sbjct 463321 TTGGNNCNCGNAAGA 463307 Score = 275 bits (304), Expect = 3e-71 Identities = 328/438 (75%), Gaps = 15/438 (3%) Strand=Plus/Minus Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 |||| ||||||||| | ||| || ||| ||||||||||||| |||||| |||||||| Sbjct 454646 AGAGNCCGATAGCGAANAAGNNCAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGN 454587 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGC 226 |||||| ||||||||||||||||||||||| || | | ||||| || ||| Sbjct 454586 GAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGC 454527 Query 227 TCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGG 281 | | || ||| | | | | | ||| | ||| |||||||||||| | | Sbjct 454526 CCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTG 454470 Query 282 GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTG 341 | || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 454469 GTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG-- 454413 Query 342 GAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTT 399 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| Sbjct 454412 GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTT 454353 Query 400 GTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT 459 || || |||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 454352 ATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGT 454293 Query 460 GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCA 517 || |||||| | ||||||||||||||||||| ||| |||| | || || || |||| | Sbjct 454292 GTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAA 454233 Query 518 TCGACCGATCCTGATGTC 535 |||||||| ||||||||| Sbjct 454232 TCGACCGANCCTGATGTC 454215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350