Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670145.1_202016-06- 20] 17 sequences; 12,136,761 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12 226 5e-57 >seq12 Length=1077600 Score = 226 bits (250), Expect = 5e-57 Identities = 175/207 (85%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 456042 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 456101 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 456102 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 456161 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 456162 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 456218 Query 179 TAACCAGACAAATCACTCCACCAACTA 205 ||| ||||||| | |||| ||| ||| Sbjct 456219 TAAGCAGACAANTNNCTCCNCCANCTA 456245 Score = 223 bits (246), Expect = 6e-56 Identities = 179/217 (82%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 465179 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 465238 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 465239 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 465298 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 465299 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 465355 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCA 215 ||| || ||||||| | ||| | | || | |||| Sbjct 465356 TAAGCANACAAATCNCNCCANCNNCNAANNNCNGCCA 465392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799868777