Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670145.1_202016-06-
20] 17 sequences; 12,136,761 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq12 226 5e-57
>seq12
Length=1077600
Score = 226 bits (250), Expect = 5e-57
Identities = 175/207 (85%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 456042 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 456101
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118
|||||||||||||||||||||||| |||| ||| || |||||||||||||||| | |
Sbjct 456102 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 456161
Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
||| ||| || | | |||||||| |||||||||||||||||||||||| |||
Sbjct 456162 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 456218
Query 179 TAACCAGACAAATCACTCCACCAACTA 205
||| ||||||| | |||| ||| |||
Sbjct 456219 TAAGCAGACAANTNNCTCCNCCANCTA 456245
Score = 223 bits (246), Expect = 6e-56
Identities = 179/217 (82%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 465179 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 465238
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118
|||||||||||||||||||||||| |||| ||| || |||||||||||||||| | |
Sbjct 465239 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 465298
Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
||| ||| || | | |||||||| |||||||||||||||||||||||| |||
Sbjct 465299 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 465355
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCA 215
||| || ||||||| | ||| | | || | ||||
Sbjct 465356 TAAGCANACAAATCNCNCCANCNNCNAANNNCNGCCA 465392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799868777
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |