Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670175.1_202016-06-
20] 17 sequences; 12,123,588 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 403 7e-110
>seq12
Length=1077491
Score = 403 bits (446), Expect = 7e-110
Identities = 415/541 (77%), Gaps = 15/541 (3%)
Strand=Plus/Minus
Query 91 AAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150
|| ||| |||||| | | || |||||| ||||||| || ||| |||||||||||||
Sbjct 454516 AANCTANATATTGNCGANAGNNNNATAGCGAACAAGTACAGNGATGGAAAGATGAAAAGA 454457
Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210
|||||| |||||||| |||||| ||||||||||||||||||||||| || | | |||
Sbjct 454456 ACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAG 454397
Query 211 ACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---G 265
|| || ||| | | || ||| | | | | | ||| | ||| |
Sbjct 454396 ACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGG 454340
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
||||||||||| | || || ||||||| || ||||||| || | |||| ||
Sbjct 454339 GCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGT 454281
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGA 383
|||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||
Sbjct 454280 ATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGA 454223
Query 384 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443
||||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||
Sbjct 454222 TGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCT 454163
Query 444 ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACC 502
|||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| |
Sbjct 454162 ATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCT 454103
Query 503 CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
|| || || |||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 454102 CGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGNATA 454043
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
||||| ||||||| |||||||| ||||||| ||||||||| | ||| |||| || |||
Sbjct 454042 GCTGTNGGGACCCNAAAGATGGNGAACTATNCCTGAATAGNGNGAANCCAGNNGANNCTC 453983
Query 622 T 622
|
Sbjct 453982 T 453982
Score = 383 bits (424), Expect = 7e-104
Identities = 409/540 (76%), Gaps = 15/540 (3%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||| |||| | | || | ||| |||||||| ||||| | |||||| ||||||||||
Sbjct 463657 TCTAAANNTAAANANTNGCGANAGANCGATAGCGAACAAGNACAGTGATGGAAAGATGAA 463598
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 463597 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463538
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 463537 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463481
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 463480 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463422
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 463421 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463364
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 463363 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463304
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498
||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 463303 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463244
Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| || || || |||| || |||||||||||| ||||||||||||||||| |||||||
Sbjct 463243 GCCTCGCAAGAGGNGCACAATNGACCGATCCTGANGTCTTCGGATGGATTTGNGTAAGAG 463184
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||| |||||||| | |||||||||| |||||||| ||| ||| | ||| ||| ||
Sbjct 463183 NATANCTGTTGGGNCNCGAAAGATGGNGAACTATGNNNGAANAGGNNGNNGCCNGAGNAA 463124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
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