Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670175.1_202016-06- 20] 17 sequences; 12,123,588 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 403 7e-110 >seq12 Length=1077491 Score = 403 bits (446), Expect = 7e-110 Identities = 415/541 (77%), Gaps = 15/541 (3%) Strand=Plus/Minus Query 91 AAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 || ||| |||||| | | || |||||| ||||||| || ||| ||||||||||||| Sbjct 454516 AANCTANATATTGNCGANAGNNNNATAGCGAACAAGTACAGNGATGGAAAGATGAAAAGA 454457 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 |||||| |||||||| |||||| ||||||||||||||||||||||| || | | ||| Sbjct 454456 ACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAG 454397 Query 211 ACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---G 265 || || ||| | | || ||| | | | | | ||| | ||| | Sbjct 454396 ACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGG 454340 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 ||||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 454339 GCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGT 454281 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGA 383 |||||||| | || |||| | ||| || ||||||||| | ||| | | | |||| Sbjct 454280 ATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGA 454223 Query 384 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443 ||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||| Sbjct 454222 TGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCT 454163 Query 444 ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACC 502 |||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | Sbjct 454162 ATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCT 454103 Query 503 CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 || || || |||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 454102 CGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGNATA 454043 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621 ||||| ||||||| |||||||| ||||||| ||||||||| | ||| |||| || ||| Sbjct 454042 GCTGTNGGGACCCNAAAGATGGNGAACTATNCCTGAATAGNGNGAANCCAGNNGANNCTC 453983 Query 622 T 622 | Sbjct 453982 T 453982 Score = 383 bits (424), Expect = 7e-104 Identities = 409/540 (76%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||| |||| | | || | ||| |||||||| ||||| | |||||| |||||||||| Sbjct 463657 TCTAAANNTAAANANTNGCGANAGANCGATAGCGAACAAGNACAGTGATGGAAAGATGAA 463598 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463597 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463538 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463537 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463481 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463480 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463422 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 463421 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463364 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463363 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463304 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 463303 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463244 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || |||| || |||||||||||| ||||||||||||||||| ||||||| Sbjct 463243 GCCTCGCAAGAGGNGCACAATNGACCGATCCTGANGTCTTCGGATGGATTTGNGTAAGAG 463184 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 ||| |||||||| | |||||||||| |||||||| ||| ||| | ||| ||| || Sbjct 463183 NATANCTGTTGGGNCNCGAAAGATGGNGAACTATGNNNGAANAGGNNGNNGCCNGAGNAA 463124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350