Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670205.1_202016-06- 20] 17 sequences; 12,126,581 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 333 1e-88 >seq12 Length=1077536 Score = 333 bits (368), Expect = 1e-88 Identities = 378/506 (75%), Gaps = 15/506 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||| ||| ||||||||||| |||| |||| |||| ||||| | |||||| |||||||||| Sbjct 463733 TCTNAAGNTAAATATTGGCGAGAGNCCGANAGCGNACAAGNACAGTGATGGAAAGATGAA 463674 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463673 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463614 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463613 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463557 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463556 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463498 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 463497 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463440 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463439 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463380 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 |||||||||| |||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 463379 GTCTATGCGAGNGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463320 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || |||| ||||||||||||||||||||| || ||||| ||| || || Sbjct 463319 GCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTNGGNTGGATNTGANTANGAN 463260 Query 558 CATAGCTGTTGGGACCCGAAAGATGG 583 || || | | | | ||||| || Sbjct 463259 CANNGCNGNTNGNNNCNNAAAGANGG 463234 Score = 325 bits (360), Expect = 2e-86 Identities = 360/474 (76%), Gaps = 15/474 (3%) Strand=Plus/Minus Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 ||||||||| |||||| |||||| ||||||| |||||| ||||||||||||| |||||| Sbjct 454586 AATATTGGCGAGAGACNNATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTG 454527 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGC 216 |||||||| |||||| ||||||||||||||||||||||| || | | ||||| || Sbjct 454526 AAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGG 454467 Query 217 CCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGC 271 ||| | | || ||| | | | | | ||| | ||| ||||||| Sbjct 454466 TGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGC 454410 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATA 331 ||||| | || || ||||||| || ||||||| || | |||| || ||||| Sbjct 454409 ATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATA 454351 Query 332 GCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGG 389 ||| | || |||| | ||| || ||||||||| | ||| | | | |||||||||| Sbjct 454350 GCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGG 454293 Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 | |||||||| || || |||||||||| |||||||||||||||||||||| ||||||||| Sbjct 454292 CATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGA 454233 Query 450 GTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG 508 |||||||||||| |||||| | ||||||||||||||||||| ||| |||| | || || Sbjct 454232 GTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAG 454173 Query 509 -GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 || |||| ||||||||| |||||||| || ||||| ||||||| |||| | || Sbjct 454172 AGGNGCACAATCGACCGANCCTGATGTNTTNGGATGNATTTGAGNAAGANCNTA 454119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350